DRSC/TRiP Functional Genomics Resources

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Protein Alignment sc and MSC

DIOPT Version :9

Sequence 1:NP_476803.1 Gene:sc / 30982 FlyBaseID:FBgn0004170 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_005089.2 Gene:MSC / 9242 HGNCID:7321 Length:206 Species:Homo sapiens


Alignment Length:86 Identity:27/86 - (31%)
Similarity:44/86 - (51%) Gaps:15/86 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 GSSPAPYNVDQSQSVQRR----NARERNRVKQVNNSFARLRQHIPQSIITDLTKGGGRGPHKKIS 147
            |..|.|.....::..|.:    |||||.|::.::.:|:||:..:|..           .|..|:|
Human    91 GKKPLPAKGSAAECKQSQRNAANARERARMRVLSKAFSRLKTSLPWV-----------PPDTKLS 144

  Fly   148 KVDTLRIAVEYIRRLQDLVDD 168
            |:||||:|..||..|:.|:.:
Human   145 KLDTLRLASSYIAHLRQLLQE 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scNP_476803.1 HLH 105..163 CDD:278439 21/57 (37%)
MSCNP_005089.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..115 5/23 (22%)
Nuclear localization signal. /evidence=ECO:0000255 71..76
bHLH_TS_musculin 105..170 CDD:381546 24/72 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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