DRSC/TRiP Functional Genomics Resources

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Protein Alignment sc and AT5G51790

DIOPT Version :9

Sequence 1:NP_476803.1 Gene:sc / 30982 FlyBaseID:FBgn0004170 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_001332480.1 Gene:AT5G51790 / 835253 AraportID:AT5G51790 Length:269 Species:Arabidopsis thaliana


Alignment Length:195 Identity:43/195 - (22%)
Similarity:72/195 - (36%) Gaps:60/195 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 MSSSVLSTNETFPTTINSATKIFRYQHIMPAPSPLIPGGNQNQPAGTMPIKTRKYTPRGMALTRC 77
            ::||:..|.|.....:..:|        :..|.|:.|..|        |.|||.           
plant    40 LTSSLEKTREKKKRLLLRST--------ISKPQPMNPSNN--------PKKTRH----------- 77

  Fly    78 SESVSSLSPGSSPAPYNVDQSQSVQR---RNARERNRVKQVNNSFARLRQHIPQSIITDLTKGGG 139
                      .|..|...|:::..::   ||. ||.|.:::...||.||..:|...|    ||  
plant    78 ----------QSHMPQERDETKKEKKLLHRNI-ERQRRQEMAILFASLRSQLPLKYI----KG-- 125

  Fly   140 RGPHKKISKVDTLRIAVEYIRRLQDLVDDLNGGSNIGANNAVTQLQLCLDESSSHSSSSSTCSSS 204
                 |.:..|.:..||.:|:..|..:.||:...:        :|:..:.:.:|.:.|.|...||
plant   126 -----KRAMSDHVNGAVSFIKDTQTRIKDLSARRD--------ELKREIGDPTSLTGSGSGSGSS 177

  Fly   205  204
            plant   178  177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scNP_476803.1 HLH 105..163 CDD:278439 17/57 (30%)
AT5G51790NP_001332480.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13935
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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