DRSC/TRiP Functional Genomics Resources

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Protein Alignment sc and bHLH38

DIOPT Version :9

Sequence 1:NP_476803.1 Gene:sc / 30982 FlyBaseID:FBgn0004170 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_191256.1 Gene:bHLH38 / 824864 AraportID:AT3G56970 Length:253 Species:Arabidopsis thaliana


Alignment Length:125 Identity:36/125 - (28%)
Similarity:54/125 - (43%) Gaps:24/125 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 GGNQNQPAGTMPIKTRKYTPRGMALTRCSES--VSSLSPGSSPAPYNVDQSQSVQRR---NARER 109
            |...|...||....|   .|:...:|....|  ||..|.|:     .:|.:..|.::   ||.||
plant    25 GAGDNLNNGTFLELT---VPQTYEVTHHQNSLGVSVSSEGN-----EIDNNPVVVKKLNHNASER 81

  Fly   110 NRVKQVNNSFARLRQHIPQSIITDLTKGGGRGPHKKISKVDTLRIAVEYIRRLQDLVDDL 169
            :|.|::|..|:.||..:|.|           ...||:|..:|:..:::||..||..|..|
plant    82 DRRKKINTLFSSLRSCLPAS-----------DQSKKLSIPETVSKSLKYIPELQQQVKRL 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scNP_476803.1 HLH 105..163 CDD:278439 18/57 (32%)
bHLH38NP_191256.1 HLH 72..124 CDD:278439 18/62 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13935
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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