Protein Alignment sc and olig4

DIOPT Version :10

• Sequence 1: NP_476803.1
• Gene: sc / 30982
• FlyBaseID: FBgn0004170
• Length: 345
• Species: Drosophila melanogaster
• Sequence 2: NP_001039180.1
• Gene: olig4 / 734024
• XenbaseID: XB-GENE-484736
• Length: 209
• Species: Xenopus tropicalis
• Alignment Length: 218
• Identity: 45/218 - (20%)
• Similarity: 73/218 - (33%)
• Gaps: 77/218 - (35%)

  Fly    13 MSSSVLSTNETFPTTINSATKIFRYQHIMPAPSPLIPGGNQNQPAGTMPIKTRKYTPRGMALTRC 77
            |.|..||:..:.|......:..|....:..|.|.    |.:..|.|.:....|:.|..
 Frog     1 MDSDCLSSRSSSPEFDRGESPQFLSGAMFQAHSV----GQRMPPRGRVKAGKRELTQE------- 54

  Fly    78 SESVSSLSPGSSPAPYNVDQSQSVQRRNARERNRVKQVNNSFARLRQHIPQSIITDLTKGGGRGP 142
                              :|.:...:.|:|||.|:..:|.:...||:.:|.|          .||
 Frog    55 ------------------NQHELRLKVNSRERQRMHDLNQAMDGLREVMPYS----------HGP 91

  Fly   143 H-KKISKVDTLRIAVEYI-------RRLQDLVDDLNGGS---------------------NIGAN 178
            . :|:||:.||.:|..||       ..::.||:::.|..                     .:.|:
 Frog    92 SVRKLSKISTLILARNYIVMLSNSLEEMKRLVNEVYGAQRAPGCASSLSTRVPQLPPVMPTVPAS 156

  Fly   179 NAVTQLQLCLDESSSHSSSSSTC 201
            :..|.|.|         |||..|
 Frog   157 DYATYLSL---------SSSDIC 170

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sc	NP_476803.1	bHLH_TS_dAS-C_like	100..166	CDD:381587	20/73 (27%)
olig4	NP_001039180.1	bHLH_TS_OLIG2_like	59..121	CDD:381568	20/71 (28%)