powered by:
Protein Alignment sc and Msgn1
DIOPT Version :9
Sequence 1: | NP_476803.1 |
Gene: | sc / 30982 |
FlyBaseID: | FBgn0004170 |
Length: | 345 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001103021.1 |
Gene: | Msgn1 / 689864 |
RGDID: | 1587516 |
Length: | 187 |
Species: | Rattus norvegicus |
Alignment Length: | 76 |
Identity: | 26/76 - (34%) |
Similarity: | 42/76 - (55%) |
Gaps: | 15/76 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 100 SVQRR---NARERNRVKQVNNSFARLRQHIPQSIITDLTKGGGRGPHKKISKVDTLRIAVEYIRR 161
||||| :.||:.|::.:.::...||.::|... ..|| :.::|:.||:..::|||.
Rat 116 SVQRRRKASEREKLRMRTLADALHTLRNYLPPVY-------SQRG--QPLTKIQTLKYTIKYIRE 171
Fly 162 LQDLVDDLNGG 172
|.|| ||||
Rat 172 LTDL---LNGG 179
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
sc | NP_476803.1 |
HLH |
105..163 |
CDD:278439 |
14/57 (25%) |
Msgn1 | NP_001103021.1 |
HLH |
119..173 |
CDD:278439 |
16/62 (26%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
Return to query results.
Submit another query.