DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment sc and Scx

DIOPT Version :9

Sequence 1:	NP_476803.1	Gene:	sc / 30982	FlyBaseID:	FBgn0004170	Length:	345	Species:	Drosophila melanogaster
Sequence 2:	NP_001123980.1	Gene:	Scx / 680712	RGDID:	1588254	Length:	209	Species:	Rattus norvegicus

Alignment Length:	203	Identity:	52/203 - (25%)
Similarity:	78/203 - (38%)	Gaps:	57/203 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly    28 INSATKIFRYQHIMPAPSPLIPG---GNQNQPAGTMPIKTRKYTPRGMALTRCS------ESVSS 83
            :.||....||  :.|..|||...   |:::..:...|.:..        ..||.      .:...
  Rat     6 LRSAPPPGRY--LYPEVSPLSEDEDRGSESSGSDEKPCRVH--------AARCGLQGARRRAGGR 60

  Fly    84 LSPGSSPAPYNVDQSQSVQRR--NARERNRVKQVNNSFARLRQHIPQSIITDLTKGGGRGPHKKI 146
            .:.||.|.|......:..||.  |||||:|...||.:|..||..||       |:...|    |:
  Rat    61 RAAGSGPGPGGRPGREPRQRHTANARERDRTNSVNTAFTALRTLIP-------TEPADR----KL 114

  Fly   147 SKVDTLRIAVEYIRRLQDLVDDLNGGSNIGANNAVTQLQLCLDESSSHSSSSSTCSSSGHNTYYQ 211
            ||::|||:|..||             |::|  |.:...:.|.|....||..:          ::.
  Rat   115 SKIETLRLASSYI-------------SHLG--NVLLVGEACGDGQPCHSGPA----------FFH 154

  Fly   212 NTISVSPL 219
            :..:.|||
  Rat   155 SGRAGSPL 162

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
sc	NP_476803.1	HLH	105..163	CDD:278439	24/57 (42%)
Scx	NP_001123980.1	bHLH_TS_scleraxis	76..143	CDD:381521	30/92 (33%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4029
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810