powered by:
Protein Alignment sc and Ascl4
DIOPT Version :9
Sequence 1: | NP_476803.1 |
Gene: | sc / 30982 |
FlyBaseID: | FBgn0004170 |
Length: | 345 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001157086.1 |
Gene: | Ascl4 / 67341 |
MGIID: | 1914591 |
Length: | 144 |
Species: | Mus musculus |
Alignment Length: | 161 |
Identity: | 47/161 - (29%) |
Similarity: | 77/161 - (47%) |
Gaps: | 36/161 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 48 IPGGNQNQPAGTMPIKTRKYTPRGMALTRCSESVSSLSPGSSPAPYNVDQSQSVQRRNARERNRV 112
:|...:..|.|.:|.: .|..:::.:.:...:...|.||.....|.:...:::||.|||.||
Mouse 12 LPSALRTAPLGALPGR----EPCRVSVRQDAADCARRRPYSSLPLGGVAEPAFLRQRNERERQRV 72
Fly 113 KQVNNSFARLRQHIPQSIITDLTKGGGRGPHKKISKVDTLRIAVEYIRRLQDLVD----DLNGGS 173
:.||..:||||||:|:.: ..:::|||:|||.|:.||::||:|:: |.|.
Mouse 73 RCVNEGYARLRQHLPREL-----------AGQRLSKVETLRAAISYIKQLQELLERHRPDCNS-- 124
Fly 174 NIGANNAVTQLQLCLDESSSHSSSSSTCSSS 204
|..|..||.:|.||.|
Mouse 125 ---------------DGESKASSGASPCSES 140
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
sc | NP_476803.1 |
HLH |
105..163 |
CDD:278439 |
24/57 (42%) |
Ascl4 | NP_001157086.1 |
HLH |
72..116 |
CDD:197674 |
22/54 (41%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
1 |
1.000 |
- |
- |
|
mtm8863 |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR13935 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.910 |
|
Return to query results.
Submit another query.