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Protein Alignment sc and mespaa
DIOPT Version :9
Sequence 1: | NP_476803.1 |
Gene: | sc / 30982 |
FlyBaseID: | FBgn0004170 |
Length: | 345 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_571626.1 |
Gene: | mespaa / 58069 |
ZFINID: | ZDB-GENE-000406-8 |
Length: | 223 |
Species: | Danio rerio |
Alignment Length: | 181 |
Identity: | 44/181 - (24%) |
Similarity: | 78/181 - (43%) |
Gaps: | 50/181 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 80 SVSSLSPGSS--------PA--------PYNVDQSQ---------------SVQRRNA--RERNR 111
:..||||.|| || |.::.::. .|:|:.| ||:.|
Zfish 35 ATGSLSPTSSIDSCSFSPPAYSLLPQIFPKSIQKTDVQPPKRTGRPKSKFPGVKRQTASEREKLR 99
Fly 112 VKQVNNSFARLRQHIPQSIITDLTKGGGRGP-HKKISKVDTLRIAVEYIRRLQDLVDDLNGGSNI 175
::.:..:...||..:|.|: .| .|.::|::|||:|::||..|. |.|..|.::
Zfish 100 MRDLTKALHHLRTFLPASV----------APVGKTLTKIETLRLAIQYISCLS---DQLGCGEDV 151
Fly 176 GANNAVTQLQLCLDESSSHSSSSSTCSSSGHNTYYQNTISVSPLQQQQQLQ 226
....|..:: :..|:|...:.|:.||:..:...|..:|:|..|.|..:|
Zfish 152 EICEAQDEV---ISTSASVFDNFSSASSASQSLPAQQFMSMSCYQTQNPVQ 199
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
sc | NP_476803.1 |
HLH |
105..163 |
CDD:278439 |
17/60 (28%) |
mespaa | NP_571626.1 |
HLH |
88..141 |
CDD:278439 |
18/62 (29%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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