Protein Alignment sc and mespaa

DIOPT Version :10

• Sequence 1: NP_476803.1
• Gene: sc / 30982
• FlyBaseID: FBgn0004170
• Length: 345
• Species: Drosophila melanogaster
• Sequence 2: NP_571626.1
• Gene: mespaa / 58069
• ZFINID: ZDB-GENE-000406-8
• Length: 223
• Species: Danio rerio
• Alignment Length: 181
• Identity: 44/181 - (24%)
• Similarity: 78/181 - (43%)
• Gaps: 50/181 - (27%)

  Fly    80 SVSSLSPGSS--------PA--------PYNVDQSQ---------------SVQRRNA--RERNR 111
            :..||||.||        ||        |.::.::.               .|:|:.|  ||:.|
Zfish    35 ATGSLSPTSSIDSCSFSPPAYSLLPQIFPKSIQKTDVQPPKRTGRPKSKFPGVKRQTASEREKLR 99

  Fly   112 VKQVNNSFARLRQHIPQSIITDLTKGGGRGP-HKKISKVDTLRIAVEYIRRLQDLVDDLNGGSNI 175
            ::.:..:...||..:|.|:          .| .|.::|::|||:|::||..|.   |.|..|.::
Zfish   100 MRDLTKALHHLRTFLPASV----------APVGKTLTKIETLRLAIQYISCLS---DQLGCGEDV 151

  Fly   176 GANNAVTQLQLCLDESSSHSSSSSTCSSSGHNTYYQNTISVSPLQQQQQLQ 226
            ....|..::   :..|:|...:.|:.||:..:...|..:|:|..|.|..:|
Zfish   152 EICEAQDEV---ISTSASVFDNFSSASSASQSLPAQQFMSMSCYQTQNPVQ 199

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
sc	NP_476803.1	bHLH_TS_dAS-C_like	100..166	CDD:381587	20/68 (29%)
mespaa	NP_571626.1	bHLH_SF	88..152	CDD:469605	22/76 (29%)