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Protein Alignment sc and scxb
DIOPT Version :9
Sequence 1: | NP_476803.1 |
Gene: | sc / 30982 |
FlyBaseID: | FBgn0004170 |
Length: | 345 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_021328670.1 |
Gene: | scxb / 567817 |
ZFINID: | ZDB-GENE-090806-1 |
Length: | 200 |
Species: | Danio rerio |
Alignment Length: | 173 |
Identity: | 46/173 - (26%) |
Similarity: | 70/173 - (40%) |
Gaps: | 38/173 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 62 IKTRKYTPRGMALTRCSESVSSLSPGSSPAPYNVDQSQSVQRRNARERNRVKQVNNSFARLRQHI 126
::.::|:.|.:|: |.....| :.:.:.....|||||.|...||.:|..||..|
Zfish 53 VRKKRYSCRPLAI-----------PTELCTP--ITEVRQRNTANARERERTNSVNTAFTALRTLI 104
Fly 127 PQSIITDLTKGGGRGPHKKISKVDTLRIAVEYIRRLQDLVDDLNGGSNIGANNAVTQLQLCLDES 191
| |:...| |:||::|||:|..||..|.:: |..|...|.. |.||..|
Zfish 105 P-------TEPADR----KLSKIETLRLASSYISHLGNV---LLVGEECGDG------QPCLRSS 149
Fly 192 SS-----HSSSSSTCSSSGHNTYYQNTISVSPLQQQQQLQRQQ 229
.| |:.|.|:..|..........|....|..|::|.:.:
Zfish 150 GSLFHHHHNVSKSSTPSPDSENSQPRQICTFCLSNQRRLNKDR 192
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
sc | NP_476803.1 |
HLH |
105..163 |
CDD:278439 |
24/57 (42%) |
scxb | XP_021328670.1 |
HLH |
78..129 |
CDD:306515 |
24/61 (39%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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