DRSC/TRiP Functional Genomics Resources

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Protein Alignment sc and LYL1

DIOPT Version :10

Sequence 1:NP_476803.1 Gene:sc / 30982 FlyBaseID:FBgn0004170 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_005574.2 Gene:LYL1 / 4066 HGNCID:6734 Length:280 Species:Homo sapiens


Alignment Length:200 Identity:48/200 - (24%)
Similarity:71/200 - (35%) Gaps:82/200 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 PAPSPLIPGGNQNQ-------------PAGTMPIKTRKYTPRGMALTRCSESVSSLSP------- 86
            |.|.|..||..|.:             |.|...|......|.|:|:.  :..:.:|.|       
Human    30 PPPKPASPGPPQVEEVGHRGGSSPPRLPPGVPVISLGHSRPPGVAMP--TTELGTLRPPLLQLST 92

  Fly    87 -GSSP---------------------APYNV--------------------DQSQSVQRR---NA 106
             |::|                     .|:::                    .|.|.|.||   |:
Human    93 LGTAPPTLALHYHPHPFLNSVYIGPAGPFSIFPSSRLKRRPSHCELDLAEGHQPQKVARRVFTNS 157

  Fly   107 RERNRVKQVNNSFARLRQHIPQSIITDLTKGGGRGPHKKISKVDTLRIAVEYI----RRLQDLVD 167
            |||.|.:.||.:||.||:.:|.           ..|.:|:||.:.||:|::||    |.|:|...
Human   158 RERWRQQNVNGAFAELRKLLPT-----------HPPDRKLSKNEVLRLAMKYIGFLVRLLRDQAA 211

  Fly   168 DLNGG 172
            .|..|
Human   212 ALAAG 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scNP_476803.1 bHLH_TS_dAS-C_like 100..166 CDD:381587 27/72 (38%)
LYL1NP_005574.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..60 7/29 (24%)
bHLH_TS_LYL1 146..210 CDD:381548 28/74 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..280 0/2 (0%)

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