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Protein Alignment sc and Hand
DIOPT Version :9
Sequence 1: | NP_476803.1 |
Gene: | sc / 30982 |
FlyBaseID: | FBgn0004170 |
Length: | 345 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_609370.2 |
Gene: | Hand / 34379 |
FlyBaseID: | FBgn0032209 |
Length: | 174 |
Species: | Drosophila melanogaster |
Alignment Length: | 78 |
Identity: | 28/78 - (35%) |
Similarity: | 46/78 - (58%) |
Gaps: | 17/78 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 101 VQRRNA---RERNRVKQVNNSFARLRQHIPQSIITDLTKGGGRGPHKKISKVDTLRIAVEYIRRL 162
|::||. :||.|.:.:||:|:.||:.|| ::.|| .|:||:.||::|:.||..|
Fly 57 VKKRNTANKKERRRTQSINNAFSYLREKIP-NVPTD----------TKLSKIKTLKLAILYINYL 110
Fly 163 QDLVD---DLNGG 172
.:::| |..||
Fly 111 VNVLDGDLDPKGG 123
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
sc | NP_476803.1 |
HLH |
105..163 |
CDD:278439 |
21/60 (35%) |
Hand | NP_609370.2 |
HLH |
59..110 |
CDD:278439 |
22/61 (36%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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