DRSC/TRiP Functional Genomics Resources

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Protein Alignment sc and FERD3L

DIOPT Version :9

Sequence 1:NP_476803.1 Gene:sc / 30982 FlyBaseID:FBgn0004170 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_690862.1 Gene:FERD3L / 222894 HGNCID:16660 Length:166 Species:Homo sapiens


Alignment Length:146 Identity:34/146 - (23%)
Similarity:59/146 - (40%) Gaps:39/146 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 PLI----PGGNQNQPAGTMPIKTRKYTPRGMALTR---CSESVSSLSPGSSPAPYNVDQSQSV-- 101
            ||:    ||.:...||    :..|:..||.||...   ..|....:..|........::.:.|  
Human    28 PLLCDFAPGVSLGDPA----LALREGRPRRMARFEEGDPEEEECEVDQGDGEEEEEEERGRGVSL 88

  Fly   102 ---------------QRRNARERNRVKQVNNSFARLRQHIPQSIITDLTKGGGRGPHKKISKVDT 151
                           |..|.|||.|:..:|.:|.:||:.:|....           .|::|:::|
Human    89 LGRPKRKRVITYAQRQAANIRERKRMFNLNEAFDQLRRKVPTFAY-----------EKRLSRIET 142

  Fly   152 LRIAVEYIRRLQDLVD 167
            ||:|:.||..:.:|::
Human   143 LRLAIVYISFMTELLE 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scNP_476803.1 HLH 105..163 CDD:278439 18/57 (32%)
FERD3LNP_690862.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 57..88 3/30 (10%)
bHLH_TS_FERD3L_NATO3 94..157 CDD:381421 19/73 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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