DRSC/TRiP Functional Genomics Resources

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Protein Alignment sc and Tcf21

DIOPT Version :9

Sequence 1:NP_476803.1 Gene:sc / 30982 FlyBaseID:FBgn0004170 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_035675.1 Gene:Tcf21 / 21412 MGIID:1202715 Length:179 Species:Mus musculus


Alignment Length:80 Identity:27/80 - (33%)
Similarity:43/80 - (53%) Gaps:13/80 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 SPAPYNVDQSQSVQRR--NARERNRVKQVNNSFARLRQHIPQSIITDLTKGGGRGPHKKISKVDT 151
            ||......:.:.|||.  |||||.|::.::.:|:||:..:|..           .|..|:||:||
Mouse    67 SPLSGVSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWV-----------PPDTKLSKLDT 120

  Fly   152 LRIAVEYIRRLQDLV 166
            ||:|..||..|:.::
Mouse   121 LRLASSYIAHLRQIL 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scNP_476803.1 HLH 105..163 CDD:278439 21/57 (37%)
Tcf21NP_035675.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..88 7/20 (35%)
HLH 80..132 CDD:278439 23/62 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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