DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment sc and Tcf15

DIOPT Version :9

Sequence 1:	NP_476803.1	Gene:	sc / 30982	FlyBaseID:	FBgn0004170	Length:	345	Species:	Drosophila melanogaster
Sequence 2:	XP_006499163.1	Gene:	Tcf15 / 21407	MGIID:	104664	Length:	262	Species:	Mus musculus

Alignment Length:	168	Identity:	44/168 - (26%)
Similarity:	59/168 - (35%)	Gaps:	67/168 - (39%)

- Green bases have known domain annotations that are detailed below.

  Fly    50 GGNQNQPAGTMPIKTRKYTPRGMALTR--------------------------------CSESVS 82
            ||.    :||..::.|...|...||.|                                |.|.:.
Mouse    52 GGG----SGTRRVEARGRAPMAFALLRPVGAHVLYPDVRLLSEDEENRSESDASDQSFGCCEGLE 112

  Fly    83 SL----SPGSSPAPYN-------VDQSQSVQRRNARERNRVKQVNNSFARLRQHIPQSIITDLTK 136
            :.    .|||.....|       |.|.|:.   |||||:|.:.||.:|..||..||...:
Mouse   113 AARRGPGPGSGRRASNGAGPVVVVRQRQAA---NARERDRTQSVNTAFTALRTLIPTEPV----- 169

  Fly   137 GGGRGPHKKISKVDTLRIAVEYIRRLQ------DLVDD 168
                  .:|:||::|||:|..||..|.      |..||
Mouse   170 ------DRKLSKIETLRLASSYIAHLANVLLLGDAADD 201

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
sc	NP_476803.1	HLH	105..163	CDD:278439	22/57 (39%)
Tcf15	XP_006499163.1	bHLH_TS_TCF15_paraxis	131..196	CDD:381476	26/78 (33%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4029
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810