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Protein Alignment sc and hlh-6
DIOPT Version :9
Sequence 1: | NP_476803.1 |
Gene: | sc / 30982 |
FlyBaseID: | FBgn0004170 |
Length: | 345 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_496070.1 |
Gene: | hlh-6 / 188539 |
WormBaseID: | WBGene00001952 |
Length: | 268 |
Species: | Caenorhabditis elegans |
Alignment Length: | 174 |
Identity: | 49/174 - (28%) |
Similarity: | 79/174 - (45%) |
Gaps: | 50/174 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 46 PLIPGGNQNQPAGTMPIKT-----RKYTPRGMALTRCSESVSSLSPGSS-PAPYNVDQ-----SQ 99
|.:|..:|.:|:....:.| :|| |:..:|.:: |.|..::. |.
Worm 122 PQLPTQSQPKPSSKASLDTSSNAFKKY-------------VNPFAPEATVPLPVELEDQYGPYSS 173
Fly 100 SVQRRNARERNRVKQVNNSFARLRQHIPQSIITDLTKGGGRGPHKKISKVDTLRIAVEYIRRLQD 164
||.:||.|||.||:.||:.:.|||:|:|... ..|:||||||||:|:.||:.|.:
Worm 174 SVWKRNERERCRVRNVNDGYERLRKHLPVHF-----------DEKRISKVDTLRLAIRYIKHLDN 227
Fly 165 LVDD---------LNGGSNIGANNAVTQLQLCLDESSSHSSSSS 199
|:.. .||.......| :.:|.|:.:.:||:
Worm 228 LLRSELHQYNCKCFNGFQEESEGN------ILIDISTFNFNSSN 265
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
sc | NP_476803.1 |
HLH |
105..163 |
CDD:278439 |
25/57 (44%) |
hlh-6 | NP_496070.1 |
HLH |
179..231 |
CDD:197674 |
27/62 (44%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm14646 |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR13935 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.910 |
|
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