DRSC/TRiP Functional Genomics Resources

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Protein Alignment sc and Nhlh1

DIOPT Version :9

Sequence 1:NP_476803.1 Gene:sc / 30982 FlyBaseID:FBgn0004170 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_035046.1 Gene:Nhlh1 / 18071 MGIID:98481 Length:133 Species:Mus musculus


Alignment Length:107 Identity:31/107 - (28%)
Similarity:48/107 - (44%) Gaps:25/107 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 GMALTRCSESVSSLSPGSSPAPYNVDQSQSVQRRNA----------RERNRVKQVNNSFARLRQH 125
            |:...|.||    |.........::.:.:..:||.|          |||.||:..|.:||.||:.
Mouse    41 GVVQVRSSE----LGESGRKDLQHLSREERRRRRRATAKYRTAHATRERIRVEAFNLAFAELRKL 101

  Fly   126 IPQSIITDLTKGGGRGPHKKISKVDTLRIAVEYIRRLQDLVD 167
            :|.           ..|.||:||::.||:|:.||..|..::|
Mouse   102 LPT-----------LPPDKKLSKIEILRLAICYISYLNHVLD 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scNP_476803.1 HLH 105..163 CDD:278439 22/67 (33%)
Nhlh1NP_035046.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..78 8/40 (20%)
HLH 77..127 CDD:306515 21/60 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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