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Protein Alignment sc and Msc
DIOPT Version :9
Sequence 1: | NP_476803.1 |
Gene: | sc / 30982 |
FlyBaseID: | FBgn0004170 |
Length: | 345 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_011236650.1 |
Gene: | Msc / 17681 |
MGIID: | 1333884 |
Length: | 217 |
Species: | Mus musculus |
Alignment Length: | 145 |
Identity: | 41/145 - (28%) |
Similarity: | 62/145 - (42%) |
Gaps: | 41/145 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 51 GNQNQPAGTMPIKTRKYTPRGMALTRCSESVSSLSPGSSPAPYNVDQSQSVQRR--NARERNRVK 113
|.:...||..|: .|:|.| ..|.:| ||. |||||.|::
Mouse 79 GGRAGGAGKKPL-----PPKGSA-AECKQS---------------------QRNAANARERARMR 116
Fly 114 QVNNSFARLRQHIPQSIITDLTKGGGRGPHKKISKVDTLRIAVEYIRRLQDLV-DDLNGGSNIGA 177
.::.:|:||:..:|.. .|..|:||:||||:|..||..|:.|: :|....|.:..
Mouse 117 VLSKAFSRLKTSLPWV-----------PPDTKLSKLDTLRLASSYIAHLRQLLQEDRYEDSYVHP 170
Fly 178 NNAVTQLQLCLDESS 192
.|.|..|:....:||
Mouse 171 VNLVGMLRSRPGDSS 185
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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