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Protein Alignment sc and hlh-3
DIOPT Version :9
| Sequence 1: | NP_476803.1 |
Gene: | sc / 30982 |
FlyBaseID: | FBgn0004170 |
Length: | 345 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_495938.4 |
Gene: | hlh-3 / 174447 |
WormBaseID: | WBGene00001950 |
Length: | 170 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 182 |
Identity: | 52/182 - (28%) |
| Similarity: | 76/182 - (41%) |
Gaps: | 58/182 - (31%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 73 ALTRCSESVSSLSPGSSPAPYNVDQSQSVQRRNARERNRVKQVNNSFARLRQHIPQSIITDLTKG 137
|.|..:.|.|:..|.||.:... .|:.|:||.|||.||.|||..|..|::.:|::
Worm 3 ASTSSTPSTSTKIPSSSKSSVT---KQTKQKRNERERKRVDQVNQGFVLLQERVPKA-------- 56
Fly 138 GGRGPHKKISKVDTLRIAVEYIRRLQDLVDDLNGGSNIGANNA------------VTQLQLC--- 187
.|...|:|||:|||.|..||:.||..: |.|:...:|: |....:|
Worm 57 --AGNKAKLSKVETLREAARYIQELQKQL----GMSSTSFHNSMPADFPTPEQSPVYPQSVCSMM 115
Fly 188 ----------------------LDESSSH----SSSSSTCSSSGHNTYYQNT 213
..:.||| |||||..:|..|:::|.:|
Worm 116 AQTPSPSYTSPYYPPPQMMSSNQHDMSSHYYQESSSSSASTSGDHHSFYSHT 167
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| sc | NP_476803.1 |
HLH |
105..163 |
CDD:278439 |
23/57 (40%) |
| hlh-3 | NP_495938.4 |
HLH |
32..83 |
CDD:197674 |
25/60 (42%) |
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
1 |
1.000 |
55 |
1.000 |
Domainoid score |
I7414 |
| eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
| Hieranoid |
1 |
1.000 |
- |
- |
|
|
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
1 |
1.050 |
50 |
1.000 |
Inparanoid score |
I4106 |
| Isobase |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
0 | 0.000 |
Not matched by this tool. |
| OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0001993 |
| OrthoInspector |
1 |
1.000 |
- |
- |
|
otm14646 |
| orthoMCL |
0 | 0.000 |
Not matched by this tool. |
| Panther |
1 |
1.100 |
- |
- |
O |
PTHR13935 |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| RoundUp |
0 | 0.000 |
Not matched by this tool. |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
1 |
0.960 |
- |
- |
|
|
|
9 | 8.920 |
|
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