DRSC/TRiP Functional Genomics Resources

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Protein Alignment sc and TCF23

DIOPT Version :9

Sequence 1:NP_476803.1 Gene:sc / 30982 FlyBaseID:FBgn0004170 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_786951.1 Gene:TCF23 / 150921 HGNCID:18602 Length:214 Species:Homo sapiens


Alignment Length:135 Identity:36/135 - (26%)
Similarity:55/135 - (40%) Gaps:43/135 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 APSPLIPGGNQNQPAGTM----PIKTRKYT----------PRGMALTRCSESVSSLSPGSSPA-P 92
            |.:.|:||.::.:...:.    |.:.|.::          |||   ||    ...|:.|.|.| |
Human    22 AKARLLPGADRKRSRLSRTRQDPWEERSWSNQRWSRATPGPRG---TR----AGGLALGRSEASP 79

  Fly    93 YNVDQSQSVQRRNARERNRVKQVNNSFARLRQHIPQSIITDLTKGGGRGPHKKISKVDTLRIAVE 157
            .|.          ||||:||:.:..:|..|:..:|           ...|..|:||:|.|.:|..
Human    80 ENA----------ARERSRVRTLRQAFLALQAALP-----------AVPPDTKLSKLDVLVLAAS 123

  Fly   158 YIRRL 162
            ||..|
Human   124 YIAHL 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scNP_476803.1 HLH 105..163 CDD:278439 19/58 (33%)
TCF23NP_786951.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..86 19/80 (24%)
HLH 83..132 CDD:197674 19/57 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..214
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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