DRSC/TRiP Functional Genomics Resources

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Protein Alignment sc and Twist2

DIOPT Version :10

Sequence 1:NP_476803.1 Gene:sc / 30982 FlyBaseID:FBgn0004170 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_031881.1 Gene:Twist2 / 13345 MGIID:104685 Length:160 Species:Mus musculus


Alignment Length:144 Identity:40/144 - (27%)
Similarity:65/144 - (45%) Gaps:37/144 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 KTRKYTPRGMALTRCSESVSSLSPG-----SSPAPYNVDQSQSVQR--RNARERNRVKQVNNSFA 120
            :.|:|:.:       |....|.:||     .||:..:.::.|| ||  .|.|||.|.:.:|.:||
Mouse    31 RKRRYSKK-------SSEDGSPTPGKRGKKGSPSAQSFEELQS-QRILANVRERQRTQSLNEAFA 87

  Fly   121 RLRQHIPQSIITDLTKGGGRGPHKKISKVDTLRIAVEYIRRLQDLV--DDLNGGSNIGANNAVTQ 183
            .||:.||..            |..|:||:.||::|..||..|..::  |::        :|.:|.
Mouse    88 ALRKIIPTL------------PSDKLSKIQTLKLAARYIDFLYQVLQSDEM--------DNKMTS 132

  Fly   184 LQLCLDESSSHSSS 197
            ......|..|::.|
Mouse   133 CSYVAHERLSYAFS 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scNP_476803.1 bHLH_TS_dAS-C_like 100..166 CDD:381587 25/67 (37%)
Twist2NP_031881.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..63 8/38 (21%)
bHLH_TS_TWIST2 51..132 CDD:381543 30/101 (30%)

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