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Protein Alignment sc and ascl3
DIOPT Version :9
Sequence 1: | NP_476803.1 |
Gene: | sc / 30982 |
FlyBaseID: | FBgn0004170 |
Length: | 345 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_004913964.2 |
Gene: | ascl3 / 100490616 |
XenbaseID: | XB-GENE-6257824 |
Length: | 193 |
Species: | Xenopus tropicalis |
Alignment Length: | 150 |
Identity: | 48/150 - (32%) |
Similarity: | 68/150 - (45%) |
Gaps: | 47/150 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 67 YTPRGMALTRCSESVSSLSPGSSPAPYNVDQSQSVQRRNARERNRVKQVNNSFARLRQHIPQSII 131
|.|....|..|..| |.|| .:::||.|||.||:.||..:||||||:|..:
Frog 69 YIPFQNQLGLCDYS-------SEPA--------FIRKRNERERERVRCVNEGYARLRQHLPLEL- 117
Fly 132 TDLTKGGGRGPHKKISKVDTLRIAVEYIRRLQDLVDDLNGGSNIGA---------NNAVTQLQ-- 185
..|::|||:|||.|:|||:.||:::| :|. :|..|.:.
Frog 118 ----------AEKRLSKVETLRAAIEYIKHLQNILD-------LGTLRPPVTEPFSNTETSISPV 165
Fly 186 LCLDESSS---HSSSSSTCS 202
|.|...|| |.:..|.|:
Frog 166 LYLSTKSSIQRHCAMGSPCT 185
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
sc | NP_476803.1 |
HLH |
105..163 |
CDD:278439 |
26/57 (46%) |
ascl3 | XP_004913964.2 |
bHLH_SF |
80..143 |
CDD:412148 |
33/88 (38%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
1 |
1.000 |
- |
- |
|
mtm14093 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.000 |
|
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