DRSC/TRiP Functional Genomics Resources

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Protein Alignment ac and AT4G25400

DIOPT Version :9

Sequence 1:NP_476824.1 Gene:ac / 30981 FlyBaseID:FBgn0000022 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001329398.1 Gene:AT4G25400 / 828643 AraportID:AT4G25400 Length:187 Species:Arabidopsis thaliana


Alignment Length:124 Identity:24/124 - (19%)
Similarity:52/124 - (41%) Gaps:27/124 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SENHSVFNDDEESSSAFNGPSVIRRNARERNRVKQVNNGFSQLRQHIPAAVIADLSNGRRGIGPG 69
            |:...|.|::|      |...::.:...:|.| :::.:.::.||..:|...|    .|:|     
plant    12 SKTPRVCNNEE------NMEKLVHKEIEKRRR-QEMASLYASLRSLLPLEFI----QGKR----- 60

  Fly    70 ANKKLSKVSTLKMAVEYIRRLQKVLHENDQQKQKQLHLQQQHLHFQQQQQHQHLYAWHQ 128
                 |....:|.||.||..||:.:.:.:.::...:.|..:......:|:      |::
plant    61 -----STSDQVKGAVNYIDYLQRNIKDINSKRDDLVLLSGRSFRSSNEQE------WNE 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acNP_476824.1 HLH 30..96 CDD:197674 16/65 (25%)
AT4G25400NP_001329398.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13935
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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