DRSC/TRiP Functional Genomics Resources

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Protein Alignment ac and AT4G20970

DIOPT Version :9

Sequence 1:NP_476824.1 Gene:ac / 30981 FlyBaseID:FBgn0000022 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_193829.2 Gene:AT4G20970 / 827844 AraportID:AT4G20970 Length:190 Species:Arabidopsis thaliana


Alignment Length:167 Identity:34/167 - (20%)
Similarity:61/167 - (36%) Gaps:49/167 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 ESSSAFNGPS-VIRRNARERNRVKQVNNGFSQLRQHIPAAVIADLSNGRRGIGPGANKKLSKVST 79
            |.|.:..|.| .:.|...|:||..|:.:.:|:|...:|              ...:.:.|:....
plant     2 EPSHSNTGQSRSVDRKTVEKNRRMQMKSLYSELISLLP--------------HHSSTEPLTLPDQ 52

  Fly    80 LKMAVEYIRRLQKVLHENDQQKQKQLHLQQQHLHFQQQQQHQHLYAWHQELQLQSPTGSTSSCNS 144
            |..|..||::||..:.:..::|                   ::|.| ...|:..:..||:|..:|
plant    53 LDEAANYIKKLQVNVEKKRERK-------------------RNLVA-TTTLEKLNSVGSSSVSSS 97

  Fly   145 ISSYCKPATSTIPGATPP-------NNFHTKLEASFE 174
            :.       .::|...|.       :.||..|..|.|
plant    98 VD-------VSVPRKLPKIEIQETGSIFHIFLVTSLE 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acNP_476824.1 HLH 30..96 CDD:197674 14/65 (22%)
AT4G20970NP_193829.2 bHLH_AtORG2_like 12..87 CDD:381484 19/108 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13935
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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