DRSC/TRiP Functional Genomics Resources

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Protein Alignment ac and bHLH39

DIOPT Version :9

Sequence 1:NP_476824.1 Gene:ac / 30981 FlyBaseID:FBgn0000022 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_191257.1 Gene:bHLH39 / 824865 AraportID:AT3G56980 Length:258 Species:Arabidopsis thaliana


Alignment Length:177 Identity:41/177 - (23%)
Similarity:82/177 - (46%) Gaps:41/177 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 ESSSAFNGPSVIRR---NARERNRVKQVNNGFSQLRQHIPAAVIADLSNGRRGIGPGANKKLSKV 77
            |.:...|.|.|:::   ||.||:|.:::|:.||.||..:||:              |.:||||..
plant    65 EGNEIDNNPVVVKKLNHNASERDRRRKINSLFSSLRSCLPAS--------------GQSKKLSIP 115

  Fly    78 STLKMAVEYIRRLQKVLHENDQQKQKQLHLQQQHLHFQQQQQHQHLYAWHQELQLQSPTGSTSSC 142
            :|:..:::||..|        |::.|:|..:::.|..|...|.      :.|..::.|.      
plant   116 ATVSRSLKYIPEL--------QEQVKKLIKKKEELLVQISGQR------NTECYVKQPP------ 160

  Fly   143 NSISSYCKPATSTIPGATPPNNFHTKLEAS-FEDYRNNSCSSGTEDE 188
            .::::|....::|..|   .|....::.:| ..::..::..||.|::
plant   161 KAVANYISTVSATRLG---DNEVMVQISSSKIHNFSISNVLSGLEED 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acNP_476824.1 HLH 30..96 CDD:197674 21/65 (32%)
bHLH39NP_191257.1 bHLH_AtORG2_like 77..153 CDD:381484 27/103 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13935
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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