DRSC/TRiP Functional Genomics Resources

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Protein Alignment ac and Hand1

DIOPT Version :9

Sequence 1:NP_476824.1 Gene:ac / 30981 FlyBaseID:FBgn0000022 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_067603.1 Gene:Hand1 / 59112 RGDID:621206 Length:216 Species:Rattus norvegicus


Alignment Length:121 Identity:31/121 - (25%)
Similarity:49/121 - (40%) Gaps:49/121 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 NGPSVIRRNARERNRVKQVNNGFSQLRQHIPAAVIADLSNGRRGIGPGANKKLSKVSTLKMAVEY 86
            :||.      :||.|.:.:|:.|::||:.||              ...|:.||||:.||::|..|
  Rat    98 SGPK------KERRRTESINSAFAELRECIP--------------NVPADTKLSKIKTLRLATSY 142

  Fly    87 IRRLQKVLHENDQ-------------------QKQKQLHLQQQHLHFQQQQQHQHL 123
            |..|..||.::.|                   .|:|:          :..|||:.|
  Rat   143 IAYLMDVLAKDAQAGDPEAFKAELKKTDGGRESKRKR----------ESPQQHEGL 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acNP_476824.1 HLH 30..96 CDD:197674 22/65 (34%)
Hand1NP_067603.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..109 5/16 (31%)
HLH 103..152 CDD:197674 22/62 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 165..203 6/34 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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