DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ac and msgn1

DIOPT Version :10

Sequence 1:NP_476824.1 Gene:ac / 30981 FlyBaseID:FBgn0000022 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_878302.1 Gene:msgn1 / 360135 ZFINID:ZDB-GENE-030722-1 Length:131 Species:Danio rerio


Alignment Length:70 Identity:19/70 - (27%)
Similarity:36/70 - (51%) Gaps:12/70 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 IRRNARERNRVKQVNNGFSQLRQHIPAAVIADLSNGRRGIGPGANKKLSKVSTLKMAVEYIRRLQ 91
            ::.:.||:.|::.:.....|||.::|...      .|||      :.|:|:.|||..::||:.|.
Zfish    73 MKASEREKLRMRSLAEALHQLRDYLPPGY------SRRG------QPLTKIQTLKYTIQYIKELS 125

  Fly    92 KVLHE 96
            .:|.:
Zfish   126 GILEQ 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acNP_476824.1 bHLH_TS_dAS-C_like 25..94 CDD:381587 18/66 (27%)
msgn1NP_878302.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..79 0/5 (0%)
bHLH_TS_Msgn1 64..129 CDD:381509 18/67 (27%)

Return to query results.
Submit another query.