DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ac and HLH4C

DIOPT Version :10

Sequence 1:NP_476824.1 Gene:ac / 30981 FlyBaseID:FBgn0000022 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001259243.1 Gene:HLH4C / 31397 FlyBaseID:FBgn0011277 Length:191 Species:Drosophila melanogaster


Alignment Length:63 Identity:24/63 - (38%)
Similarity:34/63 - (53%) Gaps:14/63 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 RERNRVKQVNNGFSQLRQHIPAAVIADLSNGRRGIGPGANKKLSKVSTLKMAVEYIRRLQKVL 94
            |||.||:..|..|::||:.:|.            :.|  :|||||:..||:|:.||..|..||
  Fly   116 RERIRVEAFNVSFAELRKLLPT------------LPP--DKKLSKIEILKLAICYIAYLNHVL 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acNP_476824.1 bHLH_TS_dAS-C_like 25..94 CDD:381587 22/61 (36%)
HLH4CNP_001259243.1 bHLH_TS_HEN1 105..165 CDD:381544 24/63 (38%)

Return to query results.
Submit another query.