DRSC/TRiP Functional Genomics Resources

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Protein Alignment ac and atoh1a

DIOPT Version :10

Sequence 1:NP_476824.1 Gene:ac / 30981 FlyBaseID:FBgn0000022 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_571166.2 Gene:atoh1a / 30303 ZFINID:ZDB-GENE-990415-17 Length:292 Species:Danio rerio


Alignment Length:187 Identity:53/187 - (28%)
Similarity:75/187 - (40%) Gaps:43/187 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SSSAFNGPSVIRR---NARERNRVKQVNNGFSQLRQHIPAAVIADLSNGRRGIGPGANKKLSKVS 78
            ||.:.|.....||   |||||.|:..:|:.|.:||..|||     ..|         :|||||..
Zfish   108 SSKSTNVVQKQRRMAANARERRRMHGLNHAFDELRSVIPA-----FDN---------DKKLSKYE 158

  Fly    79 TLKMAVEYIRRLQKVLH-------------------ENDQQKQKQLHLQQQHLHFQQQQQHQH-L 123
            ||:||..||..|..:|.                   |.|:..:....:.::........|::. .
Zfish   159 TLQMAQIYINALSDLLQGPGAKADPPNCDLLHANVLETDRSPRGSPGVCRRGTGVGYPYQYEDGT 223

  Fly   124 YAWHQELQLQSPTGSTSSCNSISSYCKPATSTIPGATPPNNF-----HTKLEASFED 175
            :....|..||||:| ||...|.:|...|.::...|...|::.     .|.||...||
Zfish   224 FNSFMEQDLQSPSG-TSKSGSEASKDSPRSNRSDGEFSPHSHFSDSDETHLELQSED 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acNP_476824.1 bHLH_TS_dAS-C_like 25..94 CDD:381587 28/71 (39%)
atoh1aNP_571166.2 bHLH_TS_ATOH1 114..177 CDD:381556 29/76 (38%)

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