DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ac and Nhlh1

DIOPT Version :10

Sequence 1:NP_476824.1 Gene:ac / 30981 FlyBaseID:FBgn0000022 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001099440.1 Gene:Nhlh1 / 289230 RGDID:1310261 Length:133 Species:Rattus norvegicus


Alignment Length:63 Identity:23/63 - (36%)
Similarity:34/63 - (53%) Gaps:14/63 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 RERNRVKQVNNGFSQLRQHIPAAVIADLSNGRRGIGPGANKKLSKVSTLKMAVEYIRRLQKVL 94
            |||.||:..|..|::||:.:|.            :.|  :|||||:..|::|:.||..|..||
  Rat    83 RERIRVEAFNLAFAELRKLLPT------------LPP--DKKLSKIEILRLAICYISYLNHVL 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acNP_476824.1 bHLH_TS_dAS-C_like 25..94 CDD:381587 21/61 (34%)
Nhlh1NP_001099440.1 bHLH_TS_HEN1 61..132 CDD:381544 23/63 (37%)

Return to query results.
Submit another query.