DRSC/TRiP Functional Genomics Resources

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Protein Alignment ac and Fer1

DIOPT Version :9

Sequence 1:NP_476824.1 Gene:ac / 30981 FlyBaseID:FBgn0000022 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001262334.1 Gene:Fer1 / 2768661 FlyBaseID:FBgn0037475 Length:256 Species:Drosophila melanogaster


Alignment Length:224 Identity:53/224 - (23%)
Similarity:90/224 - (40%) Gaps:69/224 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ENHSVFNDDEES--SSAFNG------------------PSVIR-----------RNARERNRVKQ 39
            :.||..:|||:.  ||.||.                  |..::           .|.|||.|::.
  Fly    37 DEHSSESDDEDDAYSSGFNSDQENTEKTFCPFSRRSHKPRRLKCASQMAQQRQAANLRERRRMQS 101

  Fly    40 VNNGFSQLRQHIPAAVIADLSNGRRGIGPGANKKLSKVSTLKMAVEYIRRLQKVLHENDQQKQKQ 104
            :|..|..||.|||....              .|:||||.|||:|:.||..|.:::.::....:..
  Fly   102 INEAFEGLRTHIPTLPY--------------EKRLSKVDTLKLAISYITFLSEMVKKDKNGNEPG 152

  Fly   105 LHLQQQHLHFQQQQQHQHLYAWHQELQLQSPTGSTSSCNSISSYCKPATSTIPGA-------TP- 161
            |.||:   ::|::..        :::.|:..||..:  :|:|.|.|  ....||:       || 
  Fly   153 LSLQR---NYQKEPP--------KKIILKDRTGGVA--HSLSWYRK--GDRYPGSKLYARTWTPE 202

  Fly   162 -PNNFHTKLEASFEDYRNNSCSSGTEDED 189
             |...|::....:.:..:|...:..:..|
  Fly   203 DPRGPHSQPLPLYNNSNSNQNQNSNQSSD 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acNP_476824.1 HLH 30..96 CDD:197674 24/65 (37%)
Fer1NP_001262334.1 HLH 92..144 CDD:197674 24/65 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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