DRSC/TRiP Functional Genomics Resources

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Protein Alignment ac and hlh-10

DIOPT Version :9

Sequence 1:NP_476824.1 Gene:ac / 30981 FlyBaseID:FBgn0000022 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_505401.2 Gene:hlh-10 / 191402 WormBaseID:WBGene00001954 Length:202 Species:Caenorhabditis elegans


Alignment Length:129 Identity:42/129 - (32%)
Similarity:62/129 - (48%) Gaps:38/129 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LGSENHSVFNDDEESSSA-----------------FNGPSVIRR---NARERNRVKQVNNGFSQL 47
            |..:|.|..||:.||:.:                 ..|....||   ||||||||:|::..|.||
 Worm    80 LVKQNKSEVNDENESTPSPTQNSRRRTSTGKIDRRMVGKMCTRRYEANARERNRVQQLSKMFDQL 144

  Fly    48 RQHIPAAVIADLSNGRRGIGPGANKKLSKVSTLKMAVEYIRRLQKVLHEN---DQQKQKQLHLQ 108
            |..:|   |.|            :.|:||::|||:|..||..|..:|.||   :::.:|||.::
 Worm   145 RVCLP---IED------------DAKISKLATLKVASSYIGYLGAILQENSNDEEEFKKQLQVE 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acNP_476824.1 HLH 30..96 CDD:197674 27/65 (42%)
hlh-10NP_505401.2 bHLH_SF 121..179 CDD:381792 29/72 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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