DRSC/TRiP Functional Genomics Resources

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Protein Alignment ac and hlh-13

DIOPT Version :10

Sequence 1:NP_476824.1 Gene:ac / 30981 FlyBaseID:FBgn0000022 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_508725.1 Gene:hlh-13 / 185980 WormBaseID:WBGene00001957 Length:147 Species:Caenorhabditis elegans


Alignment Length:131 Identity:34/131 - (25%)
Similarity:52/131 - (39%) Gaps:45/131 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DDEESSSAFNGPSVIRRNARERNRVKQVNNGFSQLRQHIPAAVIADLSNGRRGIGPGANKKLSKV 77
            :.||..:|         :.|||.|:..:|..|.:||.:||....              .|:|||:
 Worm    39 EPEERQTA---------SIRERKRMCSINVAFIELRNYIPTFPY--------------EKRLSKI 80

  Fly    78 STLKMAVEYIRRLQKVL---HENDQQKQKQLHLQQQHLHFQQQQQHQHLYAWHQELQLQSPTGST 139
            .||.:|:.||..|..||   .::.|..||.:|:.:..                   |:.:|..||
 Worm    81 DTLNLAIAYINMLDDVLRTPEDSGQYIQKCVHMARTG-------------------QIGAPAWST 126

  Fly   140 S 140
            |
 Worm   127 S 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acNP_476824.1 bHLH_TS_dAS-C_like 25..94 CDD:381587 20/68 (29%)
hlh-13NP_508725.1 bHLH_SF 38..100 CDD:469605 25/83 (30%)

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