DRSC/TRiP Functional Genomics Resources

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Protein Alignment ac and hlh-17

DIOPT Version :10

Sequence 1:NP_476824.1 Gene:ac / 30981 FlyBaseID:FBgn0000022 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_502928.3 Gene:hlh-17 / 185460 WormBaseID:WBGene00001961 Length:101 Species:Caenorhabditis elegans


Alignment Length:95 Identity:31/95 - (32%)
Similarity:46/95 - (48%) Gaps:17/95 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SAFNGPSV-IRRNARERNRVKQVNNGFSQLRQHIPAAVIADLSNGRRGIGPGANKKLSKVSTLKM 82
            :||..|.| :..|.|||.|:..:|.....||..||.|      :|      |:.:||||::||.:
 Worm     8 TAFAEPGVRLSINLRERCRMHDLNEALDDLRAVIPYA------HG------GSVRKLSKIATLLL 60

  Fly    83 AVEYIRRLQKVLHE----NDQQKQKQLHLQ 108
            |..:|....|.:.|    ..|.|:|..:|:
 Worm    61 AKNHIIMQAKAIEELSILVSQLKRKSENLE 90

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acNP_476824.1 bHLH_TS_dAS-C_like 25..94 CDD:381587 23/69 (33%)
hlh-17NP_502928.3 bHLH_TS_bHLHe22_like 16..76 CDD:381474 23/71 (32%)

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