DRSC/TRiP Functional Genomics Resources

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Protein Alignment ac and hlh-16

DIOPT Version :10

Sequence 1:NP_476824.1 Gene:ac / 30981 FlyBaseID:FBgn0000022 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_492372.2 Gene:hlh-16 / 183973 WormBaseID:WBGene00001960 Length:146 Species:Caenorhabditis elegans


Alignment Length:141 Identity:31/141 - (21%)
Similarity:61/141 - (43%) Gaps:36/141 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GSENHSVFNDDEESSSAFNGPSVIRR--NARERNRVKQVNNGFSQLRQHIPAAVIADLSNGRRGI 66
            |.:.....|:.|:        :::|.  |:|||.|:.::|:.|..||:.:|   ..:.:|.||  
 Worm    26 GRKKMQGLNEQEQ--------NLLRNSINSRERRRMHELNDEFETLRECLP---YPNEANSRR-- 77

  Fly    67 GPGANKKLSKVSTLKMAVEYIRRLQKVLHENDQQKQKQLHLQQQHLHFQQQQQHQHLYAWHQELQ 131
                   :||.:||.:|..:|::|....|    :.|.:|::....:.....|..          :
 Worm    78 -------MSKANTLLLASNWIKQLANANH----KLQMELNMANAKIDSLMVQLK----------K 121

  Fly   132 LQSPTGSTSSC 142
            ::.|:...|.|
 Worm   122 VEKPSSKCSKC 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acNP_476824.1 bHLH_TS_dAS-C_like 25..94 CDD:381587 21/70 (30%)
hlh-16NP_492372.2 bHLH_TS 42..96 CDD:381396 21/65 (32%)

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