DRSC/TRiP Functional Genomics Resources

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Protein Alignment ac and Msc

DIOPT Version :10

Sequence 1:NP_476824.1 Gene:ac / 30981 FlyBaseID:FBgn0000022 Length:201 Species:Drosophila melanogaster
Sequence 2:NP_001398640.1 Gene:Msc / 17681 MGIID:1333884 Length:238 Species:Mus musculus


Alignment Length:77 Identity:25/77 - (32%)
Similarity:43/77 - (55%) Gaps:15/77 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 NARERNRVKQVNNGFSQLRQHIPAAVIADLSNGRRGIGPGANKKLSKVSTLKMAVEYIRRLQKVL 94
            |||||.|::.::..||:|:..:|            .:.|  :.||||:.||::|..||..|:::|
Mouse   108 NARERARMRVLSKAFSRLKTSLP------------WVPP--DTKLSKLDTLRLASSYIAHLRQLL 158

  Fly    95 HENDQQKQKQLH 106
            .| |:.:...:|
Mouse   159 QE-DRYEDSYVH 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
acNP_476824.1 bHLH_TS_dAS-C_like 25..94 CDD:381587 21/63 (33%)
MscNP_001398640.1 bHLH_TS_musculin 100..165 CDD:381546 24/71 (34%)

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