DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment y and yellow-h

DIOPT Version :9

Sequence 1:NP_476792.1 Gene:y / 30980 FlyBaseID:FBgn0004034 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_651912.3 Gene:yellow-h / 43779 FlyBaseID:FBgn0039896 Length:463 Species:Drosophila melanogaster


Alignment Length:406 Identity:157/406 - (38%)
Similarity:249/406 - (61%) Gaps:28/406 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KLQERYSWSQLDFAFPNTRLKDQALASGDYIPQNALPVGVEHFGNRLFVTVPRWRDGIPATLTYI 88
            :|:..|.|..|||.:.....:.|::.:||::|:|.||:|::...||||||.|||::|:||:|..:
  Fly    52 QLEIVYEWKYLDFLYSTFVQRQQSILNGDFVPKNNLPLGIDVHNNRLFVTTPRWKNGVPASLGTL 116

  Fly    89 NMDRSLTGSPELIPYPDWRSN---TAGDCANSITTAYRIKVDECGRLWVLDTGTVGIGNTTTN-- 148
            ..... ..||.:.|||:|.::   ...|| :.:.:.||..||.|.|:|::|:|.|   |.|.|  
  Fly   117 PFPPK-ESSPAIKPYPNWEAHGNPNNPDC-SKLMSVYRTAVDRCDRIWLIDSGIV---NATINLN 176

  Fly   149 -PCPYAVNVFDLTTDTRIRRYELPGVDTNPNTFIANIAVDIGKNCDDAYAYFADELGYGLIAYSW 212
             .||..:.|:||.:|..|.||.|.......::..:||.||||::||||:|..:|...:||:.||.
  Fly   177 QICPPKIVVYDLKSDELIVRYNLEASHVKQDSLHSNIVVDIGEDCDDAHAIVSDVWRFGLLVYSL 241

  Fly   213 ELNKSWRFSAHSYFFPDPLRGDFNVAGINFQWGEEGIFGMSLSPIRSDGYRTLYFSPLASHRQFA 277
            ..|:|||.:.:: |:|||...||||.|:|||| .:|:||||:...:....|.|||.|:||.::|.
  Fly   242 SKNRSWRVTNYN-FYPDPFASDFNVYGLNFQW-LDGVFGMSIYYNKKIMERVLYFHPMASFKEFM 304

  Fly   278 VSTRILRDE----TRTEDSYHDFVALDERGPNSHTTSRVMSDDGIELFNLIDQNAVGCWHSSMPY 338
            |...||.:|    |.|::....|:.:.:||.||.:::..::.:||..|..:.|:.:|||.:|.||
  Fly   305 VPMNILLNESVWQTNTQEYAKYFIPIGDRGYNSQSSTSGVTRNGIMFFTQVHQDDIGCWDTSKPY 369

  Fly   339 S----PQFHGIVDRDDVGLV-FPADVKIDENK--NVWVLSDRMPVFLLSDLDYSDTNFRIYTAPL 396
            :    .:||.:   ::..|: ||.|:|:|:.|  |||::|:|:|:||.|:|||.:.||||..|.:
  Fly   370 TRAHLGKFHNM---ENSNLIQFPNDLKVDKEKDQNVWLISNRLPIFLYSNLDYGEVNFRILKANV 431

  Fly   397 ATLIENTVCDLRNNAY 412
            ..:|.|:||: .:|:|
  Fly   432 NKIIRNSVCN-PDNSY 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yNP_476792.1 MRJP 119..405 CDD:308585 118/299 (39%)
yellow-hNP_651912.3 MRJP 148..440 CDD:281074 118/299 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449195
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D202564at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

Return to query results.
Submit another query.