DRSC/TRiP Functional Genomics Resources

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Protein Alignment y and yellow-e3

DIOPT Version :9

Sequence 1:NP_476792.1 Gene:y / 30980 FlyBaseID:FBgn0004034 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_650288.1 Gene:yellow-e3 / 41651 FlyBaseID:FBgn0038150 Length:409 Species:Drosophila melanogaster


Alignment Length:448 Identity:134/448 - (29%)
Similarity:200/448 - (44%) Gaps:79/448 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ILVTLITL-VTPSWAAYKLQERYSWSQLDFAFPNTRLKDQALASGDYIPQNALPVGVE-HFG--- 67
            :||.|:.| ......|..|:|.::..|    :.|..|.|. |:.|:    ..|||.|: .:|   
  Fly     1 MLVVLLALFCAVQGQALVLKELHTLHQ----WTNLSLGDD-LSKGN----RFLPVDVDIEYGDEG 56

  Fly    68 -NRLFVTVPRWRDGIPATL-TYINMDRSLTGSPELIPYP--DWR---SNTAGDCANSITTAYRIK 125
             :|.|:|:||.....|.|| |.|.....|..:|.|.|||  :|.   :|.:|     ||:|.|..
  Fly    57 RHRTFLTIPRLGMATPFTLATVIAEHNELVENPRLEPYPNEEWHVPPNNCSG-----ITSAIRTY 116

  Fly   126 VDECGRLWVLDTGTVGIGNTTTNPCPYAVNVFDLTTDTRIRRYELPGVDTNPNTFIANIA----- 185
            :|||.||||:|:|.|    .:...||..:..|||..|..::|:.||     |:::|.:::     
  Fly   117 IDECWRLWVVDSGQV----NSLQLCPPQILTFDLVKDELVQRHALP-----PDSYIPSVSIFTAL 172

  Fly   186 -VDIGK-----NCDDAYAYFADELGYGLIAYSWELNKSWRFSAHSYFFPDPLRGDFNVAGINFQW 244
             ||:.:     .|....||.||..|||||.:.....:|||.. |....|.||          .:.
  Fly   173 VVDLAERGTPNRCVGGRAYIADAWGYGLIVFDSLTGRSWRIE-HESMKPSPL----------LRL 226

  Fly   245 G-----EEGIFGMSLSPIRSDGYRTLYFSPLASHRQFAVSTRILRDET------RTEDSYHDFVA 298
            |     :.|||.:||||...:. |.|||..|.|..:..|...::.:||      .:.||:|   :
  Fly   227 GRSSNSQAGIFTVSLSPSEVED-RFLYFHTLNSFNEMRVPLSLINNETFWKSANASRDSFH---S 287

  Fly   299 LDERGPNSHTTSRVMSDDGIELFNLIDQNAVGCWHSSMP-YSPQFHGIVDRDDVGLVFPADVKID 362
            |..||  ....|.||...|....:||...|:..|..|:. |:.....:|..:...:.|...:||:
  Fly   288 LGTRG--IQCESEVMDQSGNLYCSLISLGALVKWEESVSNYTADDLRVVAYNPHKIKFVTGLKIN 350

  Fly   363 EN----KNVWVLSDRMPVFLLSDLDYSDTNFRIYTAPLATLIENTVCDLRNNAYGPPN 416
            .|    :.:|.||.:..:|:..||..::..|:|.....|.|:.||.|.:......|.|
  Fly   351 RNSKGEEELWALSSQPKLFVGGDLPANEVKFQIIGCRTADLLANTPCTVGAAETTPTN 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yNP_476792.1 MRJP 119..405 CDD:308585 93/312 (30%)
yellow-e3NP_650288.1 MRJP 110..397 CDD:281074 93/312 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449217
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D202564at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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