DRSC/TRiP Functional Genomics Resources

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Protein Alignment y and yellow-f

DIOPT Version :10

Sequence 1:NP_476792.1 Gene:y / 30980 FlyBaseID:FBgn0004034 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_524335.1 Gene:yellow-f / 41595 FlyBaseID:FBgn0041710 Length:429 Species:Drosophila melanogaster


Alignment Length:404 Identity:143/404 - (35%)
Similarity:213/404 - (52%) Gaps:26/404 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 ERYSWSQLDF-------------------AFPNTRLKDQALASGDYIPQNALPVGVEHFGNRLFV 72
            |.:.|.||||                   .|.|:|....:.:||.:|..|.:|.||.||..||||
  Fly    28 EVFKWKQLDFYNRGDGYKDLWNRICIPDSHFYNSRKCLGSSSSGSFIQYNNVPQGVTHFRGRLFV 92

  Fly    73 TVPRWRDGIPATLTYINMDR-SLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVDECGRLWVLD 136
            ||||.:.|||:||.||::.: ..:.||.|..||:...|.......::.:.||..||.|||||.:|
  Fly    93 TVPRRQPGIPSTLNYIDLAKDGWSQSPHLRAYPNLAVNQYNASEQNLVSVYRTSVDVCGRLWFVD 157

  Fly   137 TGTVGIGNTTTNPCPYAVNVFDLTTDTRIRRYELPGVDTNPNTFIANIAVDIG-KNCDDAYAYFA 200
            ||.:...|........::.|.||..|..::|:|:|.........:|:|.:|:| :.|:|||||..
  Fly   158 TGMLEFPNNRQQIRHPSIWVIDLANDRLLKRFEIPQSIVEIGRGLASITIDVGARRCNDAYAYIP 222

  Fly   201 DELGYGLIAYSWELNKSWRFSAHSYFFPDPLRGDFNVAGINFQWGEEGIFGMSLSPIRSDGYRTL 265
            |.:...|..|....::.|.|. ||:|..|||..:.|:.|..|:| ::|||..:|...:.||.|.:
  Fly   223 DLVNRRLHVYHLRSDRIWSFE-HSFFNFDPLSDNLNIGGQTFRW-DDGIFSATLGSYKPDGSRDV 285

  Fly   266 YFSPLASHRQFAVSTRILRDETRTEDSYH--DFVALDERGPNSHTTSRVMSD-DGIELFNLIDQN 327
            :|.|:||..:|.||.|:|:.|.....|.|  ||..|..|||::.:|...... .|:..|..:.::
  Fly   286 FFHPMASTNEFVVSNRVLQQEFNAARSDHGDDFHLLGTRGPSTQSTMHKYDPRTGVIFFAEVQKS 350

  Fly   328 AVGCWHSSMPYSPQFHGIVDRDDVGLVFPADVKIDENKNVWVLSDRMPVFLLSDLDYSDTNFRIY 392
            .||||.:|.|:|.:.||.|..:...:::|:|:.|||...:||:|:.||:|:.|.||....||||:
  Fly   351 GVGCWKTSKPFSTENHGSVYSNSSEMIYPSDLTIDEEGYIWVMSNSMPIFVYSKLDVEKYNFRIW 415

  Fly   393 TAPLATLIENTVCD 406
            ..........|||:
  Fly   416 RQSTLLAKRGTVCE 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yNP_476792.1 MRJP 119..405 CDD:308585 102/289 (35%)
yellow-fNP_524335.1 MRJP 140..428 CDD:308585 102/289 (35%)

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