DRSC/TRiP Functional Genomics Resources

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Protein Alignment y and yellow-g2

DIOPT Version :9

Sequence 1:NP_476792.1 Gene:y / 30980 FlyBaseID:FBgn0004034 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_647710.1 Gene:yellow-g2 / 38295 FlyBaseID:FBgn0035328 Length:382 Species:Drosophila melanogaster


Alignment Length:415 Identity:88/415 - (21%)
Similarity:159/415 - (38%) Gaps:89/415 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GWILV--TLITLVTPSWAAYKLQERYSWSQLDFAFPNTRLKDQALASGDYIPQNALPVGVEHFGN 68
            ||...  |...|.||. .|:...:...|:...|.||....|....:||.:||:|.:....:..|:
  Fly    15 GWARSQGTKYGLWTPD-RAHSDSQPIQWTGGQFEFPCASTKSLFKSSGKFIPKNVIATRAQLIGD 78

  Fly    69 RLFVTVPRWRDGIPATLTYINMDRSLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVDECGRLW 133
            .:::.:||:|.|:||||...:: :..|.|....|||.|.....|:| .::.:...:.||:...||
  Fly    79 TIYLALPRYRKGVPATLVKTSI-KPGTCSTTFKPYPCWDLQEEGNC-KALQSVVDLVVDQNEVLW 141

  Fly   134 VLDTGTVGIGNTTTNPCPYAVNVFDLTTDTRIRRYELPGVDTNPNTFIANIAVDIGKNCDDAYAY 198
            |||||.|....|....||..|....:.|...::...|.|: |:.|:.:..:.||...: ...:.|
  Fly   142 VLDTGIVNTLETPVRKCPPKVVAMSVKTGKVLKTVSLEGL-TSSNSRLQYLVVDYAPD-GGCFVY 204

  Fly   199 FADELGYGLIAYSWELNKSWRFSAHSYFFPDPLRGDFNVAGINFQWGEEGIFGMSLSPIRSD-GY 262
            .:|.....:|.|:.:.::.:|     ...|..:........:           :.::.||.| |.
  Fly   205 VSDAANRAIIVYNLQADRGFR-----VVLPKAVTAGCRSRDV-----------LYIALIRRDCGS 253

  Fly   263 RTLYFSPLASHRQFAVSTRILRDETRTEDSYHDFVALDERGPNSHTTSRVMSDDGIELFNLIDQN 327
            ..|||:.|::::.|::.:..||                               .|:....::|  
  Fly   254 TELYFTYLSTNKLFSLKSEYLR-------------------------------SGVADGRILD-- 285

  Fly   328 AVGCWHSSMPYSPQFHGIVDRDDVGLVF---PADVKI---DENKNVWVLSDRMPVFLLSDLDYSD 386
                    :...|....|:..|:...:|   ..|.::   |.|..                 :.:
  Fly   286 --------LGKKPSRMVIIGTDNGSAIFFRNEGDAEVYRWDTNST-----------------FVE 325

  Fly   387 TNFR-IYTAPLATLIENTVCDLRNN 410
            .||: :|.:....|:.:.|.|.:.|
  Fly   326 ANFKPVYRSQTCQLVTHAVPDYKRN 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yNP_476792.1 MRJP 119..405 CDD:308585 51/293 (17%)
yellow-g2NP_647710.1 MRJP 127..381 CDD:281074 54/300 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449258
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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