DRSC/TRiP Functional Genomics Resources

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Protein Alignment y and yellow-d2

DIOPT Version :9

Sequence 1:NP_476792.1 Gene:y / 30980 FlyBaseID:FBgn0004034 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_611788.1 Gene:yellow-d2 / 37704 FlyBaseID:FBgn0034856 Length:412 Species:Drosophila melanogaster


Alignment Length:425 Identity:120/425 - (28%)
Similarity:206/425 - (48%) Gaps:41/425 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 WILVTLITLVTPSWAAYKLQERYSWSQLDFAFPNTRLKDQALASGDYIPQNALPVGVEHFGNR-- 69
            ||:..:......:.:|..|:..:....|:..||:.:.:.:||..|.|.|.:.:|:.|:.:...  
  Fly     4 WIVFGVCCWCWLAASAQALESVFGAYNLELEFPSPQERQRALRDGLYDPGSVIPIDVDVYYKHGD 68

  Fly    70 ----LFVTVPRWRDGIPATLTYINMDRSLTGSPELIPYP--DWRSNTAGDCANSITTAYRIKVDE 128
                :|||:||:..|:|.:|.|:..:....|: .|..||  :|..:...|| |.:|:.||.::||
  Fly    69 ATPSIFVTIPRFAKGVPYSLAYVTNEMRPNGT-LLQAYPSYEWHKSHGADC-NGLTSVYRTQIDE 131

  Fly   129 CGRLWVLDTGTVGIGNTTTNPCPYAVNVFDLTTDTRIRRYELP------GVDTNPNTFIA-NIAV 186
            |||:|:||:|.:..    ...||..:...||.:.....:|::|      ||    :.|:. .:.:
  Fly   132 CGRMWILDSGEIDF----IQHCPPQLYAIDLESGKVAHQYKMPKRLYKEGV----SRFVTPTVEL 188

  Fly   187 DIGKNCDDAYAYFADELGYGLIAYSWELNKSWRFSAHSYFFPDPLRGDFNVAGINFQ-WGEEGIF 250
            | ..|||..:.|.||.:|.|::.|.....:|||.. :.:.:|.|..|.|.:||.:|| |  :|..
  Fly   189 D-PHNCDVGFVYMADSIGDGIVVYDVAAQQSWRIE-NKFTYPHPDFGTFTIAGESFQLW--DGTV 249

  Fly   251 GMSLSPIRSDGYRTLYFSPLASHRQFAVSTRILRDET--RTED---SYHDFVALDERGPNSHTTS 310
            ..:|:|....|.|.:||..|:|..|.|:...::.:.:  |..|   :...|..|.:||  |...:
  Fly   250 STTLTPHGLGGRRMMYFHSLSSEWQMAIPLDVVNNGSNWRLNDVSAALDQFQLLGKRG--SQCVA 312

  Fly   311 RVMSDDGIELFNLIDQNAVGCWHSSMPYSPQFHGIVDRDDVGLVFPADVKIDEN----KNVWVLS 371
            ..||:.|..:..|:...::..|:....||.|...::..|:..|.|.:.:||..|    :.:||||
  Fly   313 AAMSESGFLICGLVQPASLLAWNIRTGYSHQNLVMLVEDEQRLQFASGLKIVRNHEGKEELWVLS 377

  Fly   372 DRMPVFLLSDLDYSDTNFRIYTAPLATLIENTVCD 406
            :|:.....:.|||.:.||||....:..|:....|:
  Fly   378 NRLQKAFGAGLDYKEINFRIQKCGVQELLSGRPCN 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yNP_476792.1 MRJP 119..405 CDD:308585 88/302 (29%)
yellow-d2NP_611788.1 MRJP 122..411 CDD:281074 88/302 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449215
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D202564at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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