DRSC/TRiP Functional Genomics Resources

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Protein Alignment y and yellow-b

DIOPT Version :10

Sequence 1:NP_476792.1 Gene:y / 30980 FlyBaseID:FBgn0004034 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_523586.1 Gene:yellow-b / 35005 FlyBaseID:FBgn0032601 Length:453 Species:Drosophila melanogaster


Alignment Length:399 Identity:148/399 - (37%)
Similarity:237/399 - (59%) Gaps:11/399 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 WAAY-----KLQERYSWSQLDFAFPNTRLKDQALASGDYIPQNALPVGVEHFGNRLFVTVPRWRD 79
            ||..     .|:..|.|.::||.:.|...:..|:..|::.|.|.:|.|:|..|:|||||:|||||
  Fly    12 WAVSALANDNLRVAYEWREMDFKYANPDQRWSAIERGEFKPANVIPFGLEVAGHRLFVTLPRWRD 76

  Fly    80 GIPATLTYINMDRSLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVDECGRLWVLDTGTVGIGN 144
            |:||:|.|::::.:.:..|.|.|:|.|:::...:....:.:.:|::.|.||||||||:...|:..
  Fly    77 GVPASLAYLDLNDTSSKGPALKPFPSWQAHNLQEAEPELVSPFRVRADRCGRLWVLDSRISGVLE 141

  Fly   145 TTTNPCPYAVNVFDLTTDTRIRRYELPGVDTNPNTFIANIAVDIGKNCDDAYAYFADELGYGLIA 209
            .|.......:.|:||..|..:||:.||.......:.:||:||: ..:|::.:||.||....||:.
  Fly   142 QTKIYGAAQLLVYDLHNDDLLRRHVLPAGQLKQGSLLANLAVE-DSDCENTFAYAADLGSPGLVV 205

  Fly   210 YSWELNKSWRFSAHSYFFPDPLRGDFNVAGINFQWGEEGIFGMSLSPIRSDGYRTLYFSPLASHR 274
            |||:..:|||.. |.:|.|||:.|:|::.||.||| ::|::|::||.....||.||||.||.|..
  Fly   206 YSWKDEESWRVQ-HHFFHPDPMAGNFSINGIEFQW-DDGLYGLALSKPLETGYATLYFHPLCSTT 268

  Fly   275 QFAVSTRILRDETRTEDS--YHDFVALDERGPNSHTTSRVMS-DDGIELFNLIDQNAVGCWHSSM 336
            :|:|.|.|||::|.....  |.:|..|..||||:...:..:. |.|:..:.|.:.|.|.||.::.
  Fly   269 EFSVDTSILRNKTLATSPMIYREFKVLGSRGPNTQAGAEFLDPDTGVLFYALPNLNEVACWRTAT 333

  Fly   337 PYSPQFHGIVDRDDVGLVFPADVKIDENKNVWVLSDRMPVFLLSDLDYSDTNFRIYTAPLATLIE 401
            .:|......:..::..||||:|:|:|:.|.:||||:::|||:..:|.....||||.||.:...||
  Fly   334 DFSHSSQSRIHMNNDTLVFPSDIKVDDQKRLWVLSNQLPVFIYDELYAGSINFRILTASVKEAIE 398

  Fly   402 NTVCDLRNN 410
            ||.|::|.:
  Fly   399 NTACEIRTS 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yNP_476792.1 MRJP 119..405 CDD:308585 110/288 (38%)
yellow-bNP_523586.1 MRJP 116..402 CDD:308585 110/288 (38%)

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