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Protein Alignment y and Rgn
DIOPT Version :9
Sequence 1: | NP_476792.1 |
Gene: | y / 30980 |
FlyBaseID: | FBgn0004034 |
Length: | 541 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_033086.1 |
Gene: | Rgn / 19733 |
MGIID: | 108024 |
Length: | 299 |
Species: | Mus musculus |
Alignment Length: | 185 |
Identity: | 38/185 - (20%) |
Similarity: | 64/185 - (34%) |
Gaps: | 52/185 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 60 PVGVEHFGNRLFVTVP-----RW--------RDGIPATLTYINMDRSLTGSPELIPYP----DWR 107
||..|...:.|||.:| || |..:.|.::.:.: |.|.|....|... :|.
Mouse 20 PVWEEASQSLLFVDIPSKIICRWDTVSNQVQRVAVDAPVSSVAL-RQLGGYVATIGTKFCALNWE 83
Fly 108 SNTAGDCA--------NSITTAYRIKVDECGRLWVLDTGTVGIGNTTTNPCPYAV-----NVFDL 159
:.:....| |..... |||..||.:. |.......|..: :::.|
Mouse 84 NQSVFVLAMVDEDKKNNRFNDG---KVDPAGRYFA--------GTMAEETAPAVLERHQGSLYSL 137
Fly 160 TTDTRIRRYELPGVDTNPNTFIANIAVDIGKNCDDAYAYFADELGYGLIAYSWEL 214
..|..:::| ...|| |:..:..:.|....|:.|.|.|.:.|:.::|
Mouse 138 FPDHSVKKY-FDQVD---------ISNGLDWSLDHKIFYYIDSLSYTVDAFDYDL 182
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
y | NP_476792.1 |
MRJP |
119..405 |
CDD:308585 |
20/101 (20%) |
Rgn | NP_033086.1 |
SGL |
16..264 |
CDD:400653 |
38/185 (21%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG3386 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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