DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or1a and Or98b

DIOPT Version :10

Sequence 1:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_524540.4 Gene:Or98b / 43375 FlyBaseID:FBgn0039582 Length:383 Species:Drosophila melanogaster


Alignment Length:404 Identity:100/404 - (24%)
Similarity:177/404 - (43%) Gaps:64/404 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 QRFTFARMGLDLQPDKK-GNVLRSPLLYCIMCLTTSFELCTVCAFMVQNRNQIVLCSEALMHGLQ 78
            |...|..:||:|..::. |:......:.||:.: .||...|: ||.:||...:...:::|...|.
  Fly    10 QSALFRLLGLELLHEQDVGHRYPWRSICCILSV-ASFMPLTI-AFGLQNVQNVEQLTDSLCSVLV 72

  Fly    79 MVSSLLKMAIFLAKSHDLVDLIQQIQSPFTEE------DLVGTEWRSQNQRGQLMAAI--YFMMC 135
            .:.:|.|:.:||....|...||.|.......|      :::.|.   :::|.|.::|:  |..:.
  Fly    73 DLLALCKIGLFLWLYKDFKFLIGQFYCVLQTETHTAVAEMIVTR---ESRRDQFISAMYAYCFIT 134

  Fly   136 AGTSVSFLLMPVALTMLKYHSTGEFAPVSSFRVLLPYDVTQPHVYAMDCCLMVFVLSFF--CCST 198
            ||.| :.|:.|::: ::.|..|||..|...|..:.|:|         :..|..:::|:|  .|:.
  Fly   135 AGLS-ACLMSPLSM-LISYQRTGELQPKFPFPSVYPWD---------NMKLSNYIISYFWNVCAA 188

  Fly   199 TG-------VDTLY-----GWCALGVSLQYRRLGQQLKRIPSCFNPSRSDFGLSGIFVEHARLLK 251
            .|       ||||:     ..|||....:::.:..:.:      |...:...|..:|..:|..|.
  Fly   189 LGVALPTVCVDTLFCSLSHNLCALFQIARHKMMHFEGR------NTKETHENLKHVFQLYALCLN 247

  Fly   252 IVQHFNYSFMEIAFVEVVIIC-----GLYCSVICQYIMPHTNQ-NFAFLGFFSLVVTTQLCIYLF 310
            :....|..|..       :||     .|:..|:|..:..:..| ...|...|:..|..|:.||.|
  Fly   248 LGHFLNEYFRP-------LICQFVAASLHLCVLCYQLSANILQPALLFYAAFTAAVVGQVSIYCF 305

  Fly   311 GAEQVRLEAERFSRLLYEVIPWQNLPPKHRKLFLFPIERAQRETVLG----AYFFELGRPLLVWI 371
            ....:..|.:.|.:.:|| ..|.:|..::.:| :..::.|...:.||    .||||..|..|:.|
  Fly   306 CGSSIHSECQLFGQAIYE-SSWPHLLQENLQL-VSSLKIAMMRSSLGCPIDGYFFEANRETLITI 368

  Fly   372 FRTAGSFTTLMNAL 385
            .|||.|:.||:.:|
  Fly   369 VRTAISYVTLLRSL 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 78/328 (24%)
Or98bNP_524540.4 7tm_6 59..372 CDD:251636 79/341 (23%)

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