DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or1a and Or92a

DIOPT Version :9

Sequence 1:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_524414.2 Gene:Or92a / 42425 FlyBaseID:FBgn0038798 Length:408 Species:Drosophila melanogaster


Alignment Length:409 Identity:80/409 - (19%)
Similarity:150/409 - (36%) Gaps:67/409 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RF--TFAR-MGLDLQPDKKGNVLRSPLLYCIMCL----TTSFELCTVCAFMVQNRNQIVLCSEAL 73
            ||  ||.: :|.||..|:..||:|..||...:.|    ..::.:..:..|:|.     ::.:..|
  Fly    22 RFPMTFYKTIGEDLYSDRDPNVIRRYLLRFYLVLGFLNFNAYVVGEIAYFIVH-----IMSTTTL 81

  Fly    74 MH--------GLQMVSSLLKMAIFLAKSHDLVDLIQQIQSPFTEEDLVGTE------WRSQNQRG 124
            :.        |...::...:..:.:.:.. ||.|:..::..| ..||....      :|....| 
  Fly    82 LEATAVAPCIGFSFMADFKQFGLTVNRKR-LVRLLDDLKEIF-PLDLEAQRKYNVSFYRKHMNR- 143

  Fly   125 QLMAAIYFMMCAGTSVSFLLMPVALTMLKYHSTGE--FAPVSSFRVLLPYDV-TQPHVY-----A 181
              :..::.::|...:.||...|...:.:||:..|.  |.....|.:|.|||. |...||     .
  Fly   144 --VMTLFTILCMTYTSSFSFYPAIKSTIKYYLMGSEIFERNYGFHILFPYDAETDLTVYWFSYWG 206

  Fly   182 MDCCLMVFVLSFFCCSTTGVDTLYGWCALGVSLQYRRLGQQLKRIPSCFNPSRSDFG-LSGIFVE 245
            :..|..|..:|:.|     ||.|.......:::.:..:...|:......:....:.. |..:.|.
  Fly   207 LAHCAYVAGVSYVC-----VDLLLIATITQLTMHFNFIANDLEAYEGGDHTDEENIKYLHNLVVY 266

  Fly   246 HARLLKIVQHFNYSFMEIAFVEVVIICGLYCSVICQYIMPHTNQNFAFLGFFSLVVTTQLCIYLF 310
            |||.|.:.:..|..|..:.....:....:.|....|....:......:..|||..:.....:..:
  Fly   267 HARALDLSEEVNNIFSFLILWNFIAASLVICFAGFQITASNVEDIVLYFIFFSASLVQVFVVCYY 331

  Fly   311 GAEQV----RLEAERFSRLLYEVIPWQNLPPKHRKLFLFPIERAQRETVLGAYFFELGRPLLVWI 371
            |.|.:    |:....|::      .|.....|::::..|.|.|:|:...:....|.   |:    
  Fly   332 GDEMISSSSRIGHSAFNQ------NWLPCSTKYKRILQFIIARSQKPASIRPPTFP---PI---- 383

  Fly   372 FRTAGSFTTLMNALYAKYE 390
                 ||.|.|..:...|:
  Fly   384 -----SFNTFMKVISMSYQ 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 57/315 (18%)
Or92aNP_524414.2 7tm_6 80..396 CDD:251636 63/343 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465719
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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