DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or1a and Or85f

DIOPT Version :9

Sequence 1:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_524289.1 Gene:Or85f / 41119 FlyBaseID:FBgn0037685 Length:392 Species:Drosophila melanogaster


Alignment Length:400 Identity:75/400 - (18%)
Similarity:154/400 - (38%) Gaps:61/400 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 FAR--------MGLDLQPDKKGNVLRSPLLYCI---MCLTTSFELCT-------VCAFMVQNRNQ 65
            |||        ||.|:....|....|  :||.|   :|| .|..:|.       |.|..:.|.:.
  Fly    11 FARLPTTVFWIMGYDMLGVPKTRSRR--ILYWIYRFLCL-ASHGVCVGVMVFRMVEAKTIDNVSL 72

  Fly    66 IVLCSEALMHGLQMVSSLLKMAIFLAKSHDLVDLIQQIQS------PFTEEDLVGTEWRSQNQRG 124
            |:..:..:.:   :::|..|.|..|.:|     .||.:.|      |.|..|.:   :...|...
  Fly    73 IMRYATLVTY---IINSDTKFATVLQRS-----AIQSLNSKLAELYPKTTLDRI---YHRVNDHY 126

  Fly   125 QLMAAIYFMMC-AGTSVSFLLMPVALTMLKYHSTGEFAPVSSFRVLLPYDVTQPHVYAMDCCLMV 188
            ...:.:|.::. .|:|:..::.|:..:::.|.:...|..:..:    ||.:..|....:...:.:
  Fly   127 WTKSFVYLVIIYIGSSIMVVIGPIITSIIAYFTHNVFTYMHCY----PYFLYDPEKDPVWIYISI 187

  Fly   189 FVLSF-----FCCSTTGVDTLYGWCALGVSLQYRRLGQQL-KRIPSCFNPSRSDFGLSGIFVEHA 247
            :.|.:     ...|..|.|....:..:.::|.:|.:.:.| ...||..:.......::.|..:..
  Fly   188 YALEWLHSTQMVISNIGADIWLLYFQVQINLHFRGIIRSLADHKPSVKHDQEDRKFIAKIVDKQV 252

  Fly   248 RLLKIVQHFNYSFMEIAFVEVVIICGLYCSV-ICQYIMPHTNQNFAFLGFFSLVVTTQLCIYLFG 311
            .|:.:....|..|.:...:.::....:.|:| :...|...|.:.|.::.|....|.....:..:|
  Fly   253 HLVSLQNDLNGIFGKSLLLSLLTTAAVICTVAVYTLIQGPTLEGFTYVIFIGTSVMQVYLVCYYG 317

  Fly   312 AEQVRLEAERFSRLLYEVIPWQNLPPKHRKLFLFPIERAQRETVLGAYFFELGRPLLVWIFRTAG 376
            .:.:.|..| .:..:|. ..:.:....:::..|..|.|||:...|.|         :.::..:..
  Fly   318 QQVLDLSGE-VAHAVYN-HDFHDASIAYKRYLLIIIIRAQQPVELNA---------MGYLSISLD 371

  Fly   377 SFTTLMNALY 386
            :|..||:..|
  Fly   372 TFKQLMSVSY 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 52/310 (17%)
Or85fNP_524289.1 7tm_6 68..381 CDD:251636 57/338 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465725
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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