DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or1a and Or71a

DIOPT Version :9

Sequence 1:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_524078.2 Gene:Or71a / 39641 FlyBaseID:FBgn0036474 Length:378 Species:Drosophila melanogaster


Alignment Length:353 Identity:68/353 - (19%)
Similarity:125/353 - (35%) Gaps:63/353 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 IMCLTTSFELCTVCAFMVQNRNQIVLCSEALMHGLQMVSSLLKMAIFLAKSHDLVDLIQQIQSPF 107
            ::||||     |.....|.|..:....::.::      |......:|..:|...||:        
  Fly    71 LICLTT-----TALGGKVINIWKYAHVAQGIL------SEWSTWDLFELRSKQEVDM-------- 116

  Fly   108 TEEDLVGTEWRSQNQRGQLMAAIYFMMCAGTSVSFLLMPVALTMLKYHSTGEFAPVSSFRVLLPY 172
                     ||.:::|...:...|.:..||.....::.|:.          :......|.:..|:
  Fly   117 ---------WRFEHRRFNRVFMFYCLCSAGVIPFIVIQPLF----------DIPNRLPFWMWTPF 162

  Fly   173 DVTQPHVYAMDCCLMVFVLSFFCCSTTGVDTLYGWCALGVSLQYRRLGQQLKRIPSCFNPSRSDF 237
            |..||.::..........:...|.....:|.:..:..|.:||..|.|||:|.::      ...|.
  Fly   163 DWQQPVLFWYAFIYQATTIPIACACNVTMDAVNWYLMLHLSLCLRMLGQRLSKL------QHDDK 221

  Fly   238 GLSGIFVE----HARLLKIVQHFNYSFMEIAFVEVVIICGLYCSVICQYIMPHTNQN---FAFLG 295
            .|...|:|    |.||.:..........:..|.::::...:.|..|....|....|:   ||.:.
  Fly   222 DLREKFLELIHLHQRLKQQALSIEIFISKSTFTQILVSSLIICFTIYSMQMSPVLQDLPGFAAMM 286

  Fly   296 FFSLVVTTQLCIYLFGAEQVRLEAERFSRLLYEVIPWQNLPPKHRKLFL-FPIERAQRETVLGAY 359
            .:.:.:..|:.:.......|...|...:..:|. ..|.::..:.|:|.| |.:...:..|:....
  Fly   287 QYLVAMIMQVMLPTIYGNAVIDSANMLTDSMYN-SDWPDMNCRMRRLVLMFMVYLNRPVTLKAGG 350

  Fly   360 FFELGRPLLVWIFRTAGSFTTLMNALYA 387
            ||.:|.||          ||..||..|:
  Fly   351 FFHIGLPL----------FTKTMNQAYS 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 56/304 (18%)
Or71aNP_524078.2 7tm_6 68..367 CDD:251636 67/350 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465749
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.