DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or1a and Or59a

DIOPT Version :9

Sequence 1:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_523821.1 Gene:Or59a / 37711 FlyBaseID:FBgn0026384 Length:379 Species:Drosophila melanogaster


Alignment Length:347 Identity:75/347 - (21%)
Similarity:132/347 - (38%) Gaps:100/347 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 IMCLTTSFELCTVCAFMVQNRNQIVLCSEALMHGLQMVSSLLKMAIFLAKSHDLVDLIQQIQSPF 107
            |:.||| |..||.|:                          :|..::.....|::::.:.::  .
  Fly    69 ILNLTT-FATCTACS--------------------------VKCLLYAYNIKDVLEMERLLR--L 104

  Fly   108 TEEDLVGTEWRS--QNQRGQLMAAIY-----FMMCA-GTSVSF-------LLMPVALTMLKYHST 157
            .:|.:||.|.||  ...|.||...:|     :|.|| ...:||       |:.|........|||
  Fly   105 LDERVVGPEQRSIYGQVRVQLRNVLYVFIGIYMPCALFAELSFLFKEERGLMYPAWFPFDWLHST 169

  Fly   158 GEFAPVSSFRVL-LPYDVTQPHVYAMDCCLMVFVLSFFCCSTTGVDTLYGWCALGVSLQYRRLGQ 221
            ..:...:::::: :.:.:.|.  |..||    |.....|..::.:..||.        ::..:| 
  Fly   170 RNYYIANAYQIVGISFQLLQN--YVSDC----FPAVVLCLISSHIKMLYN--------RFEEVG- 219

  Fly   222 QLKRIPSCFNPSR-SDFGLSGIFVEHARLLKI---VQHFNYSFMEIAF-VEVVIIC-GLYCSVIC 280
                    .:|:| ::..|.....:|..:|::   ::.|....|.|.| |..:.:| ||...|  
  Fly   220 --------LDPARDAEKDLEACITDHKHILELFRRIEAFISLPMLIQFTVTALNVCIGLAALV-- 274

  Fly   281 QYIMPHTNQNFAFLGFFSLVVTTQL---CI------YLFGAEQVRLEAERFSRLLYEVIPW--QN 334
             :.:........|: |:||.:..|:   |.      |.||    ||....||      ..|  ||
  Fly   275 -FFVSEPMARMYFI-FYSLAMPLQIFPSCFFGTDNEYWFG----RLHYAAFS------CNWHTQN 327

  Fly   335 LPPKHRKLFLFPIERAQRETVL 356
            ...| ||:.||..:..::.|.:
  Fly   328 RSFK-RKMMLFVEQSLKKSTAV 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 67/311 (22%)
Or59aNP_523821.1 7tm_6 64..368 CDD:251636 75/347 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465633
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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