DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or1a and Or47b

DIOPT Version :10

Sequence 1:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_523690.3 Gene:Or47b / 36212 FlyBaseID:FBgn0026385 Length:412 Species:Drosophila melanogaster


Alignment Length:455 Identity:87/455 - (19%)
Similarity:159/455 - (34%) Gaps:136/455 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LIEVFL------------GNLWTQRFTFARMGLDL---QPDKKGNVLRSPLLY-----CIMC-LT 47
            |:.|||            |.:....|.:.|..|.|   .|:||   |.|..||     .||| :.
  Fly    12 LLRVFLDEFRSVLRQESPGLIPRLAFYYVRAFLSLLCQYPNKK---LASLPLYRWINLFIMCNVM 73

  Fly    48 TSFELCTVCAFMVQNRNQIVLCSEALMHGLQMVSSLLKMAIFLAK---SHDLVDLIQQIQSPF-- 107
            |.|  .|:...:.:::|.|.:..:     |..:|.   ||:...|   .|...|.|.::.|.|  
  Fly    74 TIF--WTMFVALPESKNVIEMGDD-----LVWISG---MALVFTKIFYMHLRCDEIDELISDFEY 128

  Fly   108 ---------TEEDLVGTEWRSQNQRGQLMAAIY---FMMCAGTSVSFLLMP-VALTMLKYHSTGE 159
                     .:|:::|  |  |.....:.:.:|   |.:....|.:..|.| :....|.:||...
  Fly   129 YNRELRPHNIDEEVLG--W--QRLCYVIESGLYINCFCLVNFFSAAIFLQPLLGEGKLPFHSVYP 189

  Fly   160 FA-------PVSSFRVLLPYDVTQPHVYAMDCCLMVFVLSFFCCSTTGVDTLYGWCALGVSL--- 214
            |.       |.:.:.:.:...:|..|          .::|.......|:.| :...||.:.|   
  Fly   190 FQWHRLDLHPYTFWFLYIWQSLTSQH----------NLMSILMVDMVGIST-FLQTALNLKLLCI 243

  Fly   215 QYRRLGQQLKRIPSCFNPSRSDFGLSG--IFVEHARLLKIVQH---------------FN----- 257
            :.|:||               |..:|.  ...|..|:::..||               ||     
  Fly   244 EIRKLG---------------DMEVSDKRFHEEFCRVVRFHQHIIKLVGKANRAFNGAFNAQLMA 293

  Fly   258 -YSFMEIAFVEVVIICGLYCSVICQYIMPHTNQNFAFLGFFSLVVTTQLCIYLFGAEQVRLEAER 321
             :|.:.|:..|.:....:...:..::::            ..||...||.::......|..::..
  Fly   294 SFSLISISTFETMAAAAVDPKMAAKFVL------------LMLVAFIQLSLWCVSGTLVYTQSVE 346

  Fly   322 FSRLLYEVIPWQNLPPKHRKLFLFPIERAQRETVLGAYFFELGRPLLVWIFRTAGSFTTLMNALY 386
            .::..:::..|....|..::...|.|.|||:..:.      :..|.|.:   |.|::..::...|
  Fly   347 VAQAAFDINDWHTKSPGIQRDISFVILRAQKPLMY------VAEPFLPF---TLGTYMLVLKNCY 402

  Fly   387  386
              Fly   403  402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 60/347 (17%)
Or47bNP_523690.3 7tm_6 88..402 CDD:251636 64/372 (17%)

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