DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or1a and Or47a

DIOPT Version :9

Sequence 1:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_523689.1 Gene:Or47a / 36187 FlyBaseID:FBgn0026386 Length:385 Species:Drosophila melanogaster


Alignment Length:413 Identity:91/413 - (22%)
Similarity:152/413 - (36%) Gaps:74/413 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LWTQRFTFARMGLDLQPDKKGNVLRSPLLYCIMCLTTSFELCTVCAFMVQNRNQIVLCSEALMHG 76
            |..|:.|.|.:|.||..:.:....|......:..:...|..  :.|.::.|...::|.::|::..
  Fly     5 LQVQKSTIALLGFDLFSENREMWKRPYRAMNVFSIAAIFPF--ILAAVLHNWKNVLLLADAMVAL 67

  Fly    77 LQMVSSLLKMAIFLAKSHDLVDLIQQIQSPFTEEDLVGTEW----RSQNQRGQLMAAIYFMMCAG 137
            |..:..|.|.::.|....|...||.:.:...:.|...|.|:    .:.|::.|.|..: |..|  
  Fly    68 LITILGLFKFSMILYLRRDFKRLIDKFRLLMSNEAEQGEEYAEILNAANKQDQRMCTL-FRTC-- 129

  Fly   138 TSVSFLL-------MPVALTMLKYHSTGEFAPVSSFRVLLPYDVTQPHVYAMDCCLMVFVLSFF- 194
                |||       :|:....|.|...|...|...|..|.|:::   |:      :..:||||. 
  Fly   130 ----FLLAWALNSVLPLVRMGLSYWLAGHAEPELPFPCLFPWNI---HI------IRNYVLSFIW 181

  Fly   195 -CCSTTGV-------DTLY-----GWCALGVSLQY---RRLGQQLKRIPSCFNPSRSDFGLSGIF 243
             ..::|||       ||::     ..||.....||   |..|..||         .|...|:.:|
  Fly   182 SAFASTGVVLPAVSLDTIFCSFTSNLCAFFKIAQYKVVRFKGGSLK---------ESQATLNKVF 237

  Fly   244 VEHARLLKIVQHFNYSFMEIAFVEVVIICGLYCSVICQYIMPHTNQNFAFLGFFSLVVTTQLCIY 308
            ..:...|.:....|..:..|...:..|.....|.:...:.:........:...|...:..|..||
  Fly   238 ALYQTSLDMCNDLNQCYQPIICAQFFISSLQLCMLGYLFSITFAQTEGVYYASFIATIIIQAYIY 302

  Fly   309 LFGAEQVRLEAERFSRLLYEVIPWQNLPPKHRKL------------FLFPIERAQRETVLGAYFF 361
            .:..|.::.|:..|...:|: .||      |..|            .|..:.||.|...:..|||
  Fly   303 CYCGENLKTESASFEWAIYD-SPW------HESLGAGGASTSICRSLLISMMRAHRGFRITGYFF 360

  Fly   362 ELGRPLLVWIFRTAGSFTTLMNA 384
            |........|.|||.|:.|::.:
  Fly   361 EANMEAFSSIVRTAMSYITMLRS 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 74/336 (22%)
Or47aNP_523689.1 7tm_6 56..375 CDD:251636 77/350 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45472948
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 1 1.000 - - H62715
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0009998
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.940

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