DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or1a and Or45a

DIOPT Version :9

Sequence 1:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_523666.3 Gene:Or45a / 35958 FlyBaseID:FBgn0033404 Length:378 Species:Drosophila melanogaster


Alignment Length:378 Identity:88/378 - (23%)
Similarity:158/378 - (41%) Gaps:23/378 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 QRFTFARMGLDLQPDKKGNVLRSPLLYCIMCLTTSFELCTVCAFMVQNRNQIVLCSEALMHGLQM 79
            ||.....:|.|  |......|:.|:...|:.|:.......:..:.:|:.:.:...::.....:|.
  Fly     9 QRRALEIVGFD--PSTPQLSLKHPIWAGILILSLISHNWPMVVYALQDLSDLTRLTDNFAVFMQG 71

  Fly    80 VSSLLKMAIFLAKSHDLVDLIQQIQ-----SPFTEEDLVGTEWRSQNQRGQLMA-----AIYFMM 134
            ..|..|..:.:||...:..||.::.     :..|...|...|  .:||..:.:|     |.|.::
  Fly    72 SQSTFKFLVMMAKRRRIGSLIHRLHKLNQAASATPNHLEKIE--RENQLDRYVARSFRNAAYGVI 134

  Fly   135 CAGTSVSFLLMPVALTMLKYHSTGEFAPVSSFRVLLPYDVTQPHVYAMDCCLMVFVLSFFCCSTT 199
            ||..     :.|:.|.:..|..||.|.|.:........|..:||.|.......|..::.......
  Fly   135 CASA-----IAPMLLGLWGYVETGVFTPTTPMEFNFWLDERKPHFYWPIYVWGVLGVAAAAWLAI 194

  Fly   200 GVDTLYGWCALGVSLQYRRLGQQLKRIPSCFNPSRSDFGLSGIFVEHARLLKIVQHFNYSFMEIA 264
            ..|||:.|....|.:|:    |.|:.:....:.:..|..|:|....|...|.:.:..:..|.||.
  Fly   195 ATDTLFSWLTHNVVIQF----QLLELVLEEKDLNGGDSRLTGFVSRHRIALDLAKELSSIFGEIV 255

  Fly   265 FVEVVIICGLYCSVICQYIMPHTNQNFAFLGFFSLVVTTQLCIYLFGAEQVRLEAERFSRLLYEV 329
            ||:.::.....|.:..::.....:....|...|.:.:..||..|.:|.|.::.::...::.:|..
  Fly   256 FVKYMLSYLQLCMLAFRFSRSGWSAQVPFRATFLVAIIIQLSSYCYGGEYIKQQSLAIAQAVYGQ 320

  Fly   330 IPWQNLPPKHRKLFLFPIERAQRETVLGAYFFELGRPLLVWIFRTAGSFTTLM 382
            |.|..:.||.|:|:...|.||||...:..:.|.:..|||:|:.||||||..::
  Fly   321 INWPEMTPKKRRLWQMVIMRAQRPAKIFGFMFVVDLPLLLWVIRTAGSFLAML 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 73/306 (24%)
Or45aNP_523666.3 7tm_6 64..367 CDD:251636 74/313 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45472949
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 1 1.000 - - H62715
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0009998
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.940

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